Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G044000.1 | Wheat | cytosol | 53.33 | 71.38 |
| TraesCS1A01G393700.1 | Wheat | cytosol | 52.18 | 53.66 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 37.93 | 52.38 |
| TraesCS6A01G100400.1 | Wheat | cytosol | 51.72 | 51.72 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 45.98 | 49.63 |
| TraesCS6A01G047800.1 | Wheat | cytosol | 44.14 | 47.88 |
| TraesCS3A01G109100.1 | Wheat | cytosol | 43.68 | 45.02 |
| TraesCS6A01G023800.1 | Wheat | cytosol | 40.46 | 44.9 |
| TraesCS3A01G428600.1 | Wheat | cytosol | 35.4 | 44.9 |
| TraesCS3A01G456500.1 | Wheat | cytosol | 40.46 | 44.9 |
| TraesCS6A01G023900.1 | Wheat | cytosol | 40.46 | 44.67 |
| TraesCS3A01G456400.1 | Wheat | cytosol | 23.91 | 44.26 |
| TraesCS2A01G058400.1 | Wheat | cytosol | 36.78 | 42.55 |
| TraesCS2A01G066000.1 | Wheat | cytosol | 40.69 | 40.5 |
| EES04945 | Sorghum | cytosol | 37.7 | 39.05 |
| Os02t0288925-00 | Rice | cytosol | 36.55 | 37.5 |
| TraesCS3A01G461800.1 | Wheat | cytosol, peroxisome, plastid | 28.74 | 33.97 |
| TraesCS3A01G463100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 29.66 | 31.54 |
| TraesCS3A01G461700.1 | Wheat | cytosol | 28.74 | 30.05 |
| TraesCS1A01G415600.1 | Wheat | cytosol | 25.52 | 28.39 |
| TraesCS7A01G496900.1 | Wheat | cytosol | 18.85 | 28.18 |
| TraesCS3A01G462700.1 | Wheat | cytosol | 22.53 | 24.2 |
| TraesCS6A01G100500.1 | Wheat | cytosol | 42.53 | 22.59 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G010800.1 | EnsemblPlantsGene:TraesCS6A01G010800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:Gal_Oxase/kelch_b-propeller | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SUPFAM:SSF50965 | SUPFAM:SSF81383 | MapMan:35.2 |
Description
No Description!
Coordinates
chr6A:+:5071554..5074157
Molecular Weight (calculated)
49283.7 Da
IEP (calculated)
6.893
GRAVY (calculated)
-0.093
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAAEESPR RWPWVVPFVD GETEQPANAV AKVLCDDNLL REIIVRVGFP TTLVRAALVC KRWLRHAADP AFLSRFRKLH PPSLLGYYFS EWLVSSKNLG
101: APPFHLMLPQ PLLQESFGHA PITIHLSSPR FVPMLPQPPE LATVIRHLAD YRFGVHDDTL LIKHCHNGTI FTQHDKGETE LTLGVHRPLC PERGMPIVPP
201: FPCVERNLQW FGAMLSKEGS NGGLSYLYVL GTKDLGKFLV HVYVLQDGVW SPNTSATCQP CLIHWEPKAV LVDNKIYIPA RNNDNILVLD LMTSTFSTIQ
301: LPQGVSYNYF RTMLSPADDA SGVYLIHVNG FELRIWLSKG NSWLLVDTIC LNMLDHTLED DHNANVRISQ VENNAEFVFL RMGGCTLYLD VTSKTLRKLH
401: ERTENGRHFS DTKPFMMIWP PIFPVLKDDP ARDAM
101: APPFHLMLPQ PLLQESFGHA PITIHLSSPR FVPMLPQPPE LATVIRHLAD YRFGVHDDTL LIKHCHNGTI FTQHDKGETE LTLGVHRPLC PERGMPIVPP
201: FPCVERNLQW FGAMLSKEGS NGGLSYLYVL GTKDLGKFLV HVYVLQDGVW SPNTSATCQP CLIHWEPKAV LVDNKIYIPA RNNDNILVLD LMTSTFSTIQ
301: LPQGVSYNYF RTMLSPADDA SGVYLIHVNG FELRIWLSKG NSWLLVDTIC LNMLDHTLED DHNANVRISQ VENNAEFVFL RMGGCTLYLD VTSKTLRKLH
401: ERTENGRHFS DTKPFMMIWP PIFPVLKDDP ARDAM
001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
Arabidopsis Description
Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.