Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G023900.1 | Wheat | cytosol | 90.56 | 90.1 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 83.67 | 89.86 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 88.78 | 88.32 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 86.73 | 86.29 |
| HORVU7Hr1G095850.1 | Barley | cytosol | 82.4 | 84.56 |
| HORVU6Hr1G004080.1 | Barley | cytosol | 52.04 | 77.86 |
| HORVU6Hr1G004190.1 | Barley | extracellular | 27.04 | 72.11 |
| TraesCS6A01G047800.1 | Wheat | cytosol | 44.64 | 43.64 |
| TraesCS3A01G109100.1 | Wheat | cytosol | 46.68 | 43.36 |
| TraesCS3A01G456500.1 | Wheat | cytosol | 42.86 | 42.86 |
| TraesCS1A01G393700.1 | Wheat | cytosol | 46.17 | 42.79 |
| TraesCS6A01G100400.1 | Wheat | cytosol | 46.68 | 42.07 |
| TraesCS3A01G456400.1 | Wheat | cytosol | 24.74 | 41.28 |
| TraesCS6A01G010800.1 | Wheat | cytosol | 44.9 | 40.46 |
| TraesCS3A01G428600.1 | Wheat | cytosol | 34.95 | 39.94 |
| TraesCS2A01G058400.1 | Wheat | cytosol | 37.5 | 39.1 |
| EES04945 | Sorghum | cytosol | 39.8 | 37.14 |
| TraesCS2A01G066000.1 | Wheat | cytosol | 40.82 | 36.61 |
| Os02t0288925-00 | Rice | cytosol | 35.71 | 33.02 |
| TraesCS3A01G461800.1 | Wheat | cytosol, peroxisome, plastid | 30.36 | 32.34 |
| TraesCS3A01G463100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 33.16 | 31.78 |
| TraesCS3A01G461700.1 | Wheat | cytosol | 31.12 | 29.33 |
| TraesCS7A01G496900.1 | Wheat | cytosol | 21.68 | 29.21 |
| TraesCS1A01G415600.1 | Wheat | cytosol | 27.3 | 27.37 |
| TraesCS3A01G462700.1 | Wheat | cytosol | 24.74 | 23.95 |
| TraesCS6A01G100500.1 | Wheat | cytosol | 42.09 | 20.15 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G023800.1 | EnsemblPlantsGene:TraesCS6A01G023800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6A:-:11840405..11841583
Molecular Weight (calculated)
45007.7 Da
IEP (calculated)
6.995
GRAVY (calculated)
-0.028
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAISKVLED DDLLSEILLR TVFTTTLLNS ALVCTRWLAH ASNRAFLRQF REIHPPRLLG FYINKGQSTP HFIPILPQPR ELTAVIRRAT SSMGTYQRVP
101: SVPTYILGCQ NGNILIRQHD EIGTTFAVHQ VVCPERGMDI LPPFPRPQSP YLFDGTAYSR IMSKEEGDAL SYLYVLMHQT TNGKHRVYIY ILKHGIWRMN
201: HSLIIQEPPR PWSVLKSVLS NNKIYVPAGW SNIIVLDMAA SSFSIIELPE GMEYGERNTI LSQADDVVGV YLIHVKKFQL RIWLHDGYTW LLTDTILLRE
301: MFADLSVSDG NASLLINQAG DNAEFVFLDM GRCTFLLDIE RRTMHKVYEK EDGDKFFYEI HPLMMIWPPV FPALKDDPTR IVFWPSYNLL SC
101: SVPTYILGCQ NGNILIRQHD EIGTTFAVHQ VVCPERGMDI LPPFPRPQSP YLFDGTAYSR IMSKEEGDAL SYLYVLMHQT TNGKHRVYIY ILKHGIWRMN
201: HSLIIQEPPR PWSVLKSVLS NNKIYVPAGW SNIIVLDMAA SSFSIIELPE GMEYGERNTI LSQADDVVGV YLIHVKKFQL RIWLHDGYTW LLTDTILLRE
301: MFADLSVSDG NASLLINQAG DNAEFVFLDM GRCTFLLDIE RRTMHKVYEK EDGDKFFYEI HPLMMIWPPV FPALKDDPTR IVFWPSYNLL SC
001: MMISEKPLGE ESIRQDLEVL TVSRRLVKSV SQKLKKKIHK TEVVEDEEVA RGAVNCLSIS VGCRVADTGE DFEEDLSNKR WSSASEDGKG LMTICGTEEI
101: RLDCFSYGVR ERFWKKNNRR YLADSGQDYR KHVYLPDDIL EMCLMRLPLT SLLNAHLVCK KWQSMANTQR FLQMRREGSF QTPWLFLFAA LKDGCSSGDI
201: HGYDVSQDKW HRIETDLLKG RFMYSVTSIH EEIYIVGGRS MDRNSFKSHR GILVFSPSIK AWRKIASMRH ARSLPIVGAT EVTSEFSTMQ TKQNRQDRRF
301: HLSRVGGESD VYEDPHRLSV RRQNRNSADQ NGTKSHRLIR QKLDRLNRNS SKRFVLIAIG GTGIFDEPLD SGEIYDSATN TWSEMQRLPM GFGVVSCGII
401: CNGIFYAYSE NDKLSGYDIE RGFWITIQTS PIPPRVHEFY PKLVSCNHRL FMLSVSWCDE GDGQIGRRNK AVRKLWELDL VYLTWTEVSV HPDAPMDWNA
501: TYVSDQNILM GVEMFKIFGQ VLSFFTVCDI LTEEASWRHV SRNQRNQKLN LSCMNKTIAL LHL
101: RLDCFSYGVR ERFWKKNNRR YLADSGQDYR KHVYLPDDIL EMCLMRLPLT SLLNAHLVCK KWQSMANTQR FLQMRREGSF QTPWLFLFAA LKDGCSSGDI
201: HGYDVSQDKW HRIETDLLKG RFMYSVTSIH EEIYIVGGRS MDRNSFKSHR GILVFSPSIK AWRKIASMRH ARSLPIVGAT EVTSEFSTMQ TKQNRQDRRF
301: HLSRVGGESD VYEDPHRLSV RRQNRNSADQ NGTKSHRLIR QKLDRLNRNS SKRFVLIAIG GTGIFDEPLD SGEIYDSATN TWSEMQRLPM GFGVVSCGII
401: CNGIFYAYSE NDKLSGYDIE RGFWITIQTS PIPPRVHEFY PKLVSCNHRL FMLSVSWCDE GDGQIGRRNK AVRKLWELDL VYLTWTEVSV HPDAPMDWNA
501: TYVSDQNILM GVEMFKIFGQ VLSFFTVCDI LTEEASWRHV SRNQRNQKLN LSCMNKTIAL LHL
Arabidopsis Description
F-box/kelch-repeat protein At5g42360 [Source:UniProtKB/Swiss-Prot;Acc:Q9FII1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.