Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G032500.1 | Wheat | cytosol | 95.94 | 95.94 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 85.28 | 92.05 |
| TraesCS6A01G023800.1 | Wheat | cytosol | 88.32 | 88.78 |
| HORVU7Hr1G095850.1 | Barley | cytosol | 84.77 | 87.43 |
| HORVU6Hr1G004080.1 | Barley | cytosol | 53.05 | 79.77 |
| HORVU6Hr1G004190.1 | Barley | extracellular | 26.9 | 72.11 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 48.48 | 47.75 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 29.44 | 44.44 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 45.18 | 44.17 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 46.95 | 43.74 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 27.92 | 43.48 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 47.21 | 43.46 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 27.41 | 42.69 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 44.16 | 41.83 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 44.42 | 41.67 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 47.46 | 41.46 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 41.37 | 41.27 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 43.4 | 41.11 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 42.39 | 41.03 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 38.58 | 40.86 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 32.23 | 40.32 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 40.86 | 39.95 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 41.12 | 39.8 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 46.95 | 39.7 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 45.94 | 39.18 |
| EES04945 | Sorghum | cytosol | 39.59 | 37.14 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 15.48 | 34.86 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 12.69 | 33.56 |
| Os02t0288925-00 | Rice | cytosol | 35.79 | 33.25 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 33.5 | 32.59 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 32.99 | 31.78 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 32.74 | 31.08 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 32.23 | 30.24 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 31.22 | 30.07 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 30.71 | 29.73 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 18.27 | 29.39 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 19.29 | 29.23 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 41.88 | 19.43 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 45.43 | 18.8 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G032600.1 | EnsemblPlantsGene:TraesCS6B01G032600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:+:19119393..19121632
Molecular Weight (calculated)
45394.4 Da
IEP (calculated)
8.442
GRAVY (calculated)
-0.093
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVSKVLED DDLLTEILLR TVFTTTLLNS APVCTRWLAH VSDRAFLRRF REIHPPRLLG FYINKGESTP NFIPILPQPR ELTAVIQRAT SSFGTYQRVP
101: SVPTYILGCR NGNVLIRQHD KIGTTFAVHK VVCPERGMDI LPPFPRPQSQ YLFDGTAYSR ILPKEEGDDL SYLYVLMHQT RDGKHRLYIY ILKHGIWRMN
201: HSLIIQQPPR PWSVLKSVLS NNKIYVPAGW SNIIVLDLVA SSFSIIELPE GMEYGERNTI LSQADDVAGV YLIVVKKFQL RIWLHNGYTW LLMDTIYLRE
301: MFVDLSVSDG NASLLINQAG DNAEFVFLDM GRCTFLLDIK RRTMHKVYEK EDGDKFFCEI HPLMMIWPPV FHALKDDPTR NAMLRLKIKD MDGH
101: SVPTYILGCR NGNVLIRQHD KIGTTFAVHK VVCPERGMDI LPPFPRPQSQ YLFDGTAYSR ILPKEEGDDL SYLYVLMHQT RDGKHRLYIY ILKHGIWRMN
201: HSLIIQQPPR PWSVLKSVLS NNKIYVPAGW SNIIVLDLVA SSFSIIELPE GMEYGERNTI LSQADDVAGV YLIVVKKFQL RIWLHNGYTW LLMDTIYLRE
301: MFVDLSVSDG NASLLINQAG DNAEFVFLDM GRCTFLLDIK RRTMHKVYEK EDGDKFFCEI HPLMMIWPPV FHALKDDPTR NAMLRLKIKD MDGH
001: MKLSSCVLIF LLCNTFSSIS AFRLSRSQPT ERISGSAGDV LEDDPVGRLK VFVYELPSKY NKKILQKDPR CLNHMFAAEI YMQRFLLSSP VRTLNPEEAD
101: WFYVPVYTTC DLTPNGLPLP FKSPRMMRSA IQLIASNWPY WNRTEGADHF FVVPHDFGAC FHYQEEKAIG RGILPLLQRA TLVQTFGQRN HVCLKEGSIT
201: VPPYAPPQKM QSHLIPEKTP RSIFVYFRGL FYDVGNDPEG GYYARGARAA VWENFKDNPL FDISTEHPTT YYEDMQRAIF CLCPLGWAPW SPRLVEAVIF
301: GCIPVIIADD IVLPFADAIP WEDIGVFVDE KDVPYLDTIL TSIPPEVILR KQRLLANPSM KQAMLFPQPA QPGDAFHQVL NGLARKLPHE RSVYLRPGEK
401: LLNWTAGPVA DLKPW
101: WFYVPVYTTC DLTPNGLPLP FKSPRMMRSA IQLIASNWPY WNRTEGADHF FVVPHDFGAC FHYQEEKAIG RGILPLLQRA TLVQTFGQRN HVCLKEGSIT
201: VPPYAPPQKM QSHLIPEKTP RSIFVYFRGL FYDVGNDPEG GYYARGARAA VWENFKDNPL FDISTEHPTT YYEDMQRAIF CLCPLGWAPW SPRLVEAVIF
301: GCIPVIIADD IVLPFADAIP WEDIGVFVDE KDVPYLDTIL TSIPPEVILR KQRLLANPSM KQAMLFPQPA QPGDAFHQVL NGLARKLPHE RSVYLRPGEK
401: LLNWTAGPVA DLKPW
Arabidopsis Description
IRX10LGUT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAL2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.