Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 47.66 | 50.62 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 48.6 | 49.17 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 45.79 | 49.0 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 28.97 | 47.51 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 43.69 | 47.46 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 43.46 | 47.21 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 27.57 | 46.64 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 33.88 | 46.03 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 48.36 | 45.9 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 27.1 | 45.85 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 42.99 | 45.66 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 15.65 | 44.97 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 18.22 | 44.57 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 40.89 | 44.3 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 42.52 | 43.75 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 47.2 | 43.72 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 47.43 | 43.56 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 42.06 | 43.27 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 42.06 | 42.86 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 40.42 | 42.51 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 36.68 | 42.2 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 39.49 | 41.52 |
| EES04945 | Sorghum | cytosol | 38.78 | 39.52 |
| Os02t0288925-00 | Rice | cytosol | 36.45 | 36.79 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 29.91 | 31.6 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 29.91 | 31.3 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 29.67 | 31.05 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 29.44 | 30.96 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 30.37 | 30.95 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 29.21 | 30.12 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 17.76 | 29.23 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 16.59 | 28.98 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 42.76 | 21.55 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 44.39 | 19.96 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G017300.1 | EnsemblPlantsGene:TraesCS6B01G017300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:-:11153778..11155859
Molecular Weight (calculated)
48568.2 Da
IEP (calculated)
7.689
GRAVY (calculated)
-0.071
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MAELNSAQPQ LVDPENKPCI NAQPQLQWYS PILMEAVDAV SKVLDDDNLL IEILLCVDLP TTLVCAALVC KRWLQHASDR EFLCHFRKLH PPRLIGFYIQ
101: EGLMPTSPRF VLMLPAQHRE RAAVVRRAKF SLESNDDSNL RTHIMDCRNG RVLTQRLDGT TRGLKVHVPL CPQIGMKNIP PLPIHEPHHD YHCGFSQILS
201: NEGVNGLSYF HVSMASSYYG KSRVSVYMLK DGVWCMHTSV AANLPPPRMR INSVLVGSKI YMAAAMSDII ILDLKTSSFS VIQLPQGVDY GQEYGSSDTM
301: LSRADDYSSV YLINAKGLQL RIWLHKGGTW LLVDTILMLD MFANLRMSGF SVEDYRSFLR LRQVGDNAEF VFLQMRQCIF YLDIKCRTLC EVHDITKYDG
401: SSCHINPLMM IWPPTFPANK DNPARNAM
101: EGLMPTSPRF VLMLPAQHRE RAAVVRRAKF SLESNDDSNL RTHIMDCRNG RVLTQRLDGT TRGLKVHVPL CPQIGMKNIP PLPIHEPHHD YHCGFSQILS
201: NEGVNGLSYF HVSMASSYYG KSRVSVYMLK DGVWCMHTSV AANLPPPRMR INSVLVGSKI YMAAAMSDII ILDLKTSSFS VIQLPQGVDY GQEYGSSDTM
301: LSRADDYSSV YLINAKGLQL RIWLHKGGTW LLVDTILMLD MFANLRMSGF SVEDYRSFLR LRQVGDNAEF VFLQMRQCIF YLDIKCRTLC EVHDITKYDG
401: SSCHINPLMM IWPPTFPANK DNPARNAM
001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P
Arabidopsis Description
HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.