Factsheet for TraesCS5B01G357900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G497000.1	Wheat	cytosol	46.12	52.66
TraesCS6B01G032800.1	Wheat	cytosol	45.45	51.25
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	45.68	51.12
TraesCS3B01G466200.1	Wheat	cytosol	46.56	50.48
TraesCS3B01G496900.1	Wheat	cytosol	45.45	50.37
TraesCS3B01G496600.2	Wheat	cytosol	46.78	50.24
TraesCS3B01G496700.1	Wheat	cytosol	45.23	50.12
TraesCS6B01G017300.1	Wheat	cytosol	45.9	48.36
TraesCS3B01G128100.1	Wheat	cytosol	27.94	48.28
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	44.79	47.75
TraesCS6B01G032600.1	Wheat	cytosol	41.46	47.46
TraesCS1B01G083300.1	Wheat	cytosol	26.39	47.04
TraesCS6B01G032500.1	Wheat	cytosol	41.02	46.95
TraesCS4B01G391600.1	Wheat	cytosol	47.67	46.14
TraesCS6B01G095400.1	Wheat	cytosol	32.15	46.03
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	37.92	45.97
TraesCS6B01G095500.1	Wheat	cytosol	41.02	45.91
TraesCS6B01G128500.1	Wheat	cytosol	41.91	45.43
TraesCS6B01G019500.1	Wheat	cytosol	25.06	44.66
TraesCS6B01G120300.1	Wheat	cytosol	14.63	44.3
TraesCS6B01G120000.1	Wheat	cytosol	17.07	44.0
TraesCS6B01G128400.1	Wheat	cytosol	44.57	43.51
EES04945	Sorghum	cytosol	37.47	40.24
Os02t0288925-00	Rice	cytosol	36.36	38.68
TraesCS3B01G504400.1	Wheat	cytosol	30.38	33.5
TraesCS3B01G504300.1	Wheat	cytosol	30.82	33.49
TraesCS3B01G506300.1	Wheat	cytosol	29.93	33.33
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.71	32.76
TraesCS3B01G505900.1	Wheat	cytosol	29.49	32.68
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	29.71	31.9
TraesCS7B01G400700.1	Wheat	cytosol	16.41	28.46
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	15.3	28.16
TraesCS5B01G497300.1	Wheat	cytosol	43.02	22.85
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	44.12	20.9

Protein Annotations

EnsemblPlants:TraesCS5B01G357900.1	EnsemblPlantsGene:TraesCS5B01G357900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr5B:-:537532280..537536593

Molecular Weight (calculated)

50784.8 Da

IEP (calculated)

8.649

GRAVY (calculated)

-0.137

Length

451 amino acids

Sequence
(BLAST)

001: MKNPSCEQAI SSSLIPFHKE ANKEMGGETQ PLAAAAVTVS KVLDDDDLLI EILLRVGFPT TLVCAALVCK RWLGHASDRA FLRRFRKLHP PRLLGFYIDD
101: FGLPPGLTLV FVPVLPQPPE LAVVVRRARF KLKTNNARSA TIRDCQNGSV FFTLYNGRSR KSTRVHCPLC PERGPAILPQ LPRPGLGSNC TFKQVLSKEE
201: GDGMSYYYLY VESARRAETE SMLHVYMLQD GSRWTHHLLD IDNLPEPRWE PKAVLVDNKI YMAAAETAII VLDLSDLSLS TIQLPQGVEH GVIGTTMLAR
301: AHDASGVYLI HVEEFQLRIW LHKGGNWSLV DTIFLHEMCA NLRNSCCTIE DEDRLLPLNQ VVDYGDFVFL KMGGCALQLD IKCRTLRKVY EAKNGHLGFN
401: IHPFMMIWPP TFPTLKYDPA RNAMWRRNIP GSSWMAPTPR VTRAASRKSS S

Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)

001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI

Arabidopsis Description

Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.