Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G449700.1 | Wheat | cytosol | 91.65 | 91.65 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 69.04 | 71.14 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 68.06 | 68.06 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 66.58 | 65.14 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 63.39 | 61.43 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 50.86 | 55.65 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 47.91 | 48.75 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 47.17 | 46.15 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 50.37 | 45.45 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 44.96 | 45.41 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 28.75 | 44.83 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 27.27 | 43.87 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 33.91 | 43.81 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 44.23 | 42.55 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 41.03 | 42.39 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 41.28 | 41.69 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 40.05 | 41.37 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 42.51 | 40.42 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 25.06 | 40.32 |
| EES04945 | Sorghum | cytosol | 41.52 | 40.24 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 45.7 | 39.91 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 44.72 | 39.39 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 14.25 | 38.93 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 15.72 | 36.57 |
| Os02t0288925-00 | Rice | cytosol | 36.85 | 35.38 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 32.19 | 31.19 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 30.96 | 31.11 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 30.96 | 30.81 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 30.96 | 30.36 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 29.98 | 29.98 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 29.48 | 29.34 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 18.43 | 28.85 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 15.97 | 26.53 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 47.67 | 22.85 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 47.42 | 20.27 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G496900.1 | EnsemblPlantsGene:TraesCS3B01G496900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3B:+:740502992..740505015
Molecular Weight (calculated)
46346.1 Da
IEP (calculated)
6.233
GRAVY (calculated)
0.067
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGEARLPPA CVSKVLDDED LLSEIIVRVG FPTSLVRAAA VCRRWLSHAS DGAFLRRFRE LHPPRLLGFY IAERDYPASE RFFPMLHLPP ELAAVVRRAS
101: FRPDAYDGAH AHVVGCSNGS VLTHRASFCL DTFKLVFARH RPLCYERGMR MTILPGLKLR TSPGSIYNWT QLFSKQEEDG WSYFYLTVKD IMDAPGVLLY
201: VYMLQNGDDV WRLHLTLASD LHAWKSPKGV LFDNKIYLAA DDAILILDLT ASILSTIQLP QGVSFDLSGT TMLSRADDGS VLYLIHIKEL QLQIWLHNGG
301: NWLLVDTVCL SEMCANFLED EPTADIRINH VGDYNEFVFL EMGRCVLYLD VKNRTLRKVY KMTADEYYLG DIYPFMMSWP PIFPTLSPAR FAFCPFGDLY
401: GLLVEFT
101: FRPDAYDGAH AHVVGCSNGS VLTHRASFCL DTFKLVFARH RPLCYERGMR MTILPGLKLR TSPGSIYNWT QLFSKQEEDG WSYFYLTVKD IMDAPGVLLY
201: VYMLQNGDDV WRLHLTLASD LHAWKSPKGV LFDNKIYLAA DDAILILDLT ASILSTIQLP QGVSFDLSGT TMLSRADDGS VLYLIHIKEL QLQIWLHNGG
301: NWLLVDTVCL SEMCANFLED EPTADIRINH VGDYNEFVFL EMGRCVLYLD VKNRTLRKVY KMTADEYYLG DIYPFMMSWP PIFPTLSPAR FAFCPFGDLY
401: GLLVEFT
001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL
Arabidopsis Description
F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.