Factsheet for TraesCS4B01G391600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G034900.1	Wheat	cytosol	76.61	87.5
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	58.58	67.74
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	46.78	51.54
TraesCS1B01G083300.1	Wheat	cytosol	27.04	49.8
TraesCS6B01G032800.1	Wheat	cytosol	41.85	48.75
TraesCS6B01G128400.1	Wheat	cytosol	48.07	48.48
TraesCS6B01G095500.1	Wheat	cytosol	41.85	48.39
TraesCS6B01G095400.1	Wheat	cytosol	32.4	47.94
TraesCS6B01G019500.1	Wheat	cytosol	25.97	47.83
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	46.14	47.67
TraesCS3B01G128100.1	Wheat	cytosol	26.61	47.51
TraesCS6B01G017300.1	Wheat	cytosol	43.56	47.43
TraesCS6B01G032600.1	Wheat	cytosol	39.7	46.95
TraesCS6B01G032500.1	Wheat	cytosol	39.48	46.7
TraesCS3B01G497000.1	Wheat	cytosol	39.27	46.33
TraesCS3B01G496700.1	Wheat	cytosol	40.13	45.95
TraesCS3B01G496900.1	Wheat	cytosol	39.91	45.7
TraesCS3B01G466200.1	Wheat	cytosol	40.34	45.19
TraesCS3B01G496600.2	Wheat	cytosol	39.7	44.05
TraesCS6B01G120000.1	Wheat	cytosol	16.09	42.86
TraesCS6B01G128500.1	Wheat	cytosol	38.2	42.79
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	34.12	42.74
TraesCS6B01G120300.1	Wheat	cytosol	13.52	42.28
EES04945	Sorghum	cytosol	37.34	41.43
Os02t0288925-00	Rice	cytosol	33.91	37.26
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.18	33.25
TraesCS3B01G504400.1	Wheat	cytosol	29.18	33.25
TraesCS3B01G506300.1	Wheat	cytosol	28.76	33.09
TraesCS3B01G505900.1	Wheat	cytosol	28.76	32.92
TraesCS3B01G504300.1	Wheat	cytosol	29.18	32.77
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	29.18	32.38
TraesCS7B01G400700.1	Wheat	cytosol	16.95	30.38
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	15.02	28.57
TraesCS5B01G497300.1	Wheat	cytosol	40.13	22.03
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	43.78	21.43

Protein Annotations

EnsemblPlants:TraesCS4B01G391600.1	EnsemblPlantsGene:TraesCS4B01G391600	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2

Description

No Description!

Coordinates

chr4B:-:667350497..667352963

Molecular Weight (calculated)

53356.9 Da

IEP (calculated)

6.996

GRAVY (calculated)

-0.042

Length

466 amino acids

Sequence
(BLAST)

001: MTWSDQPYLK GSTGRAPPYS RQLDTVPVPV SIPVGGHRFE WSGGTLDVLT AATLLAGGIC LTPLRFCRFS SEEEKSCMDL ELQRYTPTSM VAAVSKVLDD
101: DDLLVEILLR VAFPTTLVHA ALVCRRWFHH ASDRRFLRRF RKIHPPRLLG FYAFFERARF IPMQPQPPEL AVVVRHLASC RFAYYINIED CRNGNVLTSG
201: RQEGVWTHQV YHLLCPERDM PIIPPLPCAE IGIYHILAEI LSKEEGDGLG LSYFYLLVEL AKEANKVMVR VYMLQDGAWC MLTLATSQLH YPQPRPKPVL
301: VHNKIYMAAA QSDDIIVLDL IDSSFSTIHL PQGVEYASSE IMLSRTNDAS GVYLIHVRPK EFQLCVWLHK GGNWMLVDTI YLHEMHAILG KKDHPYVRIG
401: KVGDDAQFVF LEVSRYIFYL DIKCRTLRKV YEETDDDRCY GGVHPFMMIW PPTFPALKDD PERFAF

Best Arabidopsis Sequence Match ( AT3G18720.1 )
(BLAST)

001: MRTRRQTYPP IAESLTARSI VQALPASATI SGNGGPKKKK NCVNRGLWDK QIPTDLLQEI LSRLGLKANI HASLVCKTWL KEAVSVRKFQ SRPWLFYPQS
101: QRGGPKEGDY VLFNPSRSQT HHLKFPELTG YRNKLACAKD GWLLVVKDNP DVVFFLNPFT GERICLPQVP QNSTRDCLTF SAAPTSTSCC VISFTPQSFL
201: YAVVKVDTWR PGESVWTTHH FDQKRYGEVI NRCIFSNGMF YCLSTSGRLS VFDPSRETWN VLPVKPCRAF RRKIMLVRQV FMTEHEGDIF VVTTRRVNNR
301: KLLAFKLNLQ GNVWEEMKVP NGLTVFSSDA TSLTRAGLPE EERNILYSSD IDDFVKSSHP TFYYYDCSAW LQPPHDNFNF

Arabidopsis Description

F-box/kelch-repeat protein At3g18720 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSA5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.