Factsheet for TraesCS3B01G497100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G497000.1	Wheat	cytosol	56.45	53.16
TraesCS3B01G496700.1	Wheat	cytosol	57.26	52.33
TraesCS3B01G466200.1	Wheat	cytosol	58.33	52.16
TraesCS3B01G496900.1	Wheat	cytosol	55.65	50.86
TraesCS3B01G496600.2	Wheat	cytosol	53.76	47.62
TraesCS6B01G120300.1	Wheat	cytosol	16.67	41.61
TraesCS6B01G032800.1	Wheat	cytosol	44.35	41.25
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	43.01	39.7
TraesCS6B01G120000.1	Wheat	cytosol	18.55	39.43
TraesCS6B01G128500.1	Wheat	cytosol	43.28	38.7
TraesCS6B01G032600.1	Wheat	cytosol	40.86	38.58
TraesCS6B01G095500.1	Wheat	cytosol	41.4	38.21
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	45.97	37.92
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	43.01	37.83
EES04945	Sorghum	cytosol	42.2	37.38
TraesCS6B01G032500.1	Wheat	cytosol	39.52	37.31
TraesCS6B01G017300.1	Wheat	cytosol	42.2	36.68
TraesCS1B01G083300.1	Wheat	cytosol	24.46	35.97
TraesCS6B01G095400.1	Wheat	cytosol	29.84	35.24
TraesCS6B01G128400.1	Wheat	cytosol	43.55	35.06
TraesCS4B01G391600.1	Wheat	cytosol	42.74	34.12
TraesCS3B01G128100.1	Wheat	cytosol	23.12	32.95
Os02t0288925-00	Rice	cytosol	36.83	32.31
TraesCS6B01G019500.1	Wheat	cytosol	21.77	32.02
TraesCS3B01G506300.1	Wheat	cytosol	32.8	30.12
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.26	29.34
TraesCS3B01G504400.1	Wheat	cytosol	32.26	29.34
TraesCS3B01G505900.1	Wheat	cytosol	31.18	28.5
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	31.72	28.1
TraesCS3B01G504300.1	Wheat	cytosol	31.18	27.95
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	14.78	22.45
TraesCS7B01G400700.1	Wheat	cytosol	15.32	21.92
TraesCS5B01G497300.1	Wheat	cytosol	45.16	19.79
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	44.89	17.54

Protein Annotations

EnsemblPlants:TraesCS3B01G497100.1	EnsemblPlantsGene:TraesCS3B01G497100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SUPFAM:SSF81383	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3B:+:740540622..740542843

Molecular Weight (calculated)

41675.3 Da

IEP (calculated)

5.129

GRAVY (calculated)

-0.052

Length

372 amino acids

Sequence
(BLAST)

001: MEGEAQSPLG LGGTGGDAQP PLRLDGTEGD AQLPSACVSK VLDDDNLLTE IIVRVGFPTS LVRAAGVCRR WLSHASDRAF LRRFRELHPP TLLGFYIKGL
101: HKGATRFVPM LPQPPELAAV IRRTDFRLDT YDSDTNQMLM AVCRNGSVVT SWHKVKSPRD EIAFTVQYPL CYGRDMTILP GLSLTIEESG LGCRAVLSGN
201: KIYAVSSMKD IVVVDLKASI SSTIPAPHGV DFELLDTVML PRADDGSGVY LIHIKELQLH IWLHNGDNWL LVDTICLTEI CADLLEDDSS VDFTIIHVGD
301: YNEFVFLEMD QCILYLDIKR RTLRRVSREY DLFEIYPFMM SWPPIFPVLM DSPSRTENGR CTSIEHNEKI KS

Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)

001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI

Arabidopsis Description

Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.