Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G023200.1 | Wheat | cytosol | 95.25 | 95.25 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 94.25 | 85.88 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 52.0 | 50.0 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 48.0 | 48.73 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 48.0 | 48.61 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 47.75 | 48.48 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 48.75 | 48.39 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 50.5 | 48.1 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 48.75 | 47.91 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 29.75 | 47.04 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 49.25 | 46.57 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 47.25 | 46.44 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 49.0 | 45.79 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 51.25 | 45.45 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 47.0 | 45.19 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 41.25 | 44.35 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 28.75 | 44.06 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 49.25 | 42.64 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 26.75 | 42.29 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 33.0 | 41.9 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 48.75 | 41.85 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 41.5 | 41.19 |
| EES04945 | Sorghum | cytosol | 41.75 | 39.76 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 14.75 | 39.6 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 16.5 | 37.71 |
| Os02t0288925-00 | Rice | cytosol | 39.0 | 36.79 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 33.25 | 32.84 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 33.0 | 32.27 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 33.75 | 32.14 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 33.0 | 31.81 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 32.25 | 31.54 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 31.75 | 31.2 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 19.0 | 29.23 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 16.75 | 27.35 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 46.0 | 21.67 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.75 | 19.64 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G032800.1 | EnsemblPlantsGene:TraesCS6B01G032800 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:+:19197247..19199372
Molecular Weight (calculated)
45125.0 Da
IEP (calculated)
7.171
GRAVY (calculated)
-0.108
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGETPPATA AAVSKVLDDD NLLAEILIRV GLPTTLVRAA AVCKRWLHHA SDRKFLHRFR ELHPPRLLGL HVIEQGRFAS PTAERFVPML PLPPELDAVV
101: RRVSSSLGSY RRDNVRSTRV IGCRNGSLLI EHRMIEGRST LGVHRLLFPE KDMTFVPARP RPKIHSSVHA YQGEILTKEG EGGLSYFYML VPYTMEREDE
201: VQVYMLKDGV WCMHRNLPVD GKLYLSRPDE GPMLVDNKIY IAVDRSEITV LDLTSLSFSE IQLPQGVDRG SIGERSTSLA RADAAGVYLI HVKELQIRLW
301: LHKEGDWLLV DTICLREMLA SLSMLGSNAS LRIKSVGDNA EFVFLEMGRC ALHLDVKCRT LRKVYEVTEE GAYLGDIYPV MMIWPPAFPA LKDDPAREAM
101: RRVSSSLGSY RRDNVRSTRV IGCRNGSLLI EHRMIEGRST LGVHRLLFPE KDMTFVPARP RPKIHSSVHA YQGEILTKEG EGGLSYFYML VPYTMEREDE
201: VQVYMLKDGV WCMHRNLPVD GKLYLSRPDE GPMLVDNKIY IAVDRSEITV LDLTSLSFSE IQLPQGVDRG SIGERSTSLA RADAAGVYLI HVKELQIRLW
301: LHKEGDWLLV DTICLREMLA SLSMLGSNAS LRIKSVGDNA EFVFLEMGRC ALHLDVKCRT LRKVYEVTEE GAYLGDIYPV MMIWPPAFPA LKDDPAREAM
001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
Arabidopsis Description
Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.