Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G023200.1 | Wheat | cytosol | 87.93 | 96.5 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 85.88 | 94.25 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 46.01 | 50.25 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 43.96 | 49.36 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 44.19 | 49.24 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 43.96 | 48.98 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 40.55 | 48.77 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 25.97 | 48.51 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 43.28 | 47.38 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 43.74 | 47.17 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 45.33 | 46.71 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 46.47 | 44.84 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 43.05 | 44.06 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 34.62 | 43.8 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 42.6 | 43.79 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 30.3 | 42.63 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 44.42 | 42.48 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 26.88 | 41.84 |
| EES04945 | Sorghum | cytosol | 37.59 | 39.29 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 28.93 | 39.08 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 20.73 | 38.24 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 37.36 | 36.77 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 33.71 | 36.36 |
| Os02t0288925-00 | Rice | cytosol | 35.08 | 36.32 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 22.78 | 36.23 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 12.53 | 35.95 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 33.03 | 32.44 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 30.52 | 32.21 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 29.84 | 32.03 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 29.61 | 31.78 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 30.3 | 31.67 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 19.13 | 30.88 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 27.79 | 30.05 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 30.07 | 29.8 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 26.65 | 29.55 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 29.61 | 28.76 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 43.51 | 22.44 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G027500.1 | EnsemblPlantsGene:TraesCS6D01G027500 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 |
Description
No Description!
Coordinates
chr6D:+:10440427..10442939
Molecular Weight (calculated)
49525.4 Da
IEP (calculated)
6.631
GRAVY (calculated)
-0.094
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFDLPQPPS KVLDDDELLA AETLLRVGFP TMLVCADIME GETPPATAVA VSKVLDDDNL LAEILIRVGL PTTLVRAAAV CRRWLHHASD RKFLRRFREL
101: HPPRLLGLHV IEQGRFAWPT AERFVPMLPL PPELDAVVRR VSSSLGSYRR DDVRSTRVID CRNGSLLIEH HMIEGSSRLG VHRLLFPEKG MTFVPARPRP
201: KIHSSVHAYQ EEILTKEGEG GLSYLYMLVP YTREREHEVQ VYMLKDGVWC MHPNLPVDGK LYLSRRPDEG PVLVDNKIYI AVDRSEITVL DLTSLSFSET
301: QLTQGVDRGG IGERSTSLAR ADAAGVYLIH VKELQIRLWL HKEGDWLLVD TICLREMLAS LSMLGSNASL RIKSVGDNAE FVFLEMGRCT LHLDVKYRTL
401: RKVYEVTEEG AYLGDIYPVM MIWPPAFPAL KDGPARGAM
101: HPPRLLGLHV IEQGRFAWPT AERFVPMLPL PPELDAVVRR VSSSLGSYRR DDVRSTRVID CRNGSLLIEH HMIEGSSRLG VHRLLFPEKG MTFVPARPRP
201: KIHSSVHAYQ EEILTKEGEG GLSYLYMLVP YTREREHEVQ VYMLKDGVWC MHPNLPVDGK LYLSRRPDEG PVLVDNKIYI AVDRSEITVL DLTSLSFSET
301: QLTQGVDRGG IGERSTSLAR ADAAGVYLIH VKELQIRLWL HKEGDWLLVD TICLREMLAS LSMLGSNASL RIKSVGDNAE FVFLEMGRCT LHLDVKYRTL
401: RKVYEVTEEG AYLGDIYPVM MIWPPAFPAL KDGPARGAM
001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI
Arabidopsis Description
Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.