Factsheet for TraesCS5D01G363100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G363300.1	Wheat	cytosol, nucleus, peroxisome	67.91	79.03
TraesCS6D01G055300.1	Wheat	cytosol	49.45	55.97
TraesCS6D01G023200.1	Wheat	cytosol	45.05	51.25
TraesCS3D01G449600.1	Wheat	cytosol	43.74	49.63
TraesCS3D01G449700.1	Wheat	cytosol	44.18	49.39
TraesCS6D01G027300.1	Wheat	cytosol	39.34	49.04
TraesCS6D01G027100.1	Wheat	cytosol	41.98	48.48
TraesCS5D01G497500.1	Wheat	cytosol	24.62	47.66
TraesCS3D01G110900.2	Wheat	cytosol	44.62	47.32
TraesCS6D01G027200.1	Wheat	cytosol	40.88	47.21
TraesCS3D01G449800.1	Wheat	cytosol, mitochondrion, plasma membrane	29.23	47.16
TraesCS6D01G027500.1	Wheat	cytosol	44.84	46.47
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	35.38	46.4
TraesCS6D01G069200.1	Wheat	cytosol	31.65	46.15
TraesCS3D01G449500.1	Wheat	cytosol	42.64	45.54
TraesCS2D01G057400.2	Wheat	cytosol	41.76	44.5
TraesCS1D01G065900.1	Wheat	cytosol	42.42	42.05
TraesCS6D01G044000.1	Wheat	cytosol	29.67	41.54
TraesCS6D01G080900.1	Wheat	cytosol	24.84	40.94
EES04945	Sorghum	cytosol	36.7	39.76
Os02t0288925-00	Rice	cytosol	36.26	38.92
TraesCS2D01G064400.1	Wheat	cytosol	37.58	38.34
TraesCS6D01G080600.1	Wheat	cytosol	19.56	37.4
TraesCS3D01G456400.1	Wheat	cytosol, plastid	12.53	37.25
TraesCS7D01G484000.1	Wheat	cytosol, peroxisome, plastid	32.31	36.12
TraesCS7D01G483700.1	Wheat	cytosol, mitochondrion	32.97	33.56
TraesCS3D01G455200.1	Wheat	cytosol	30.11	33.5
TraesCS3D01G457000.1	Wheat	plasma membrane	29.67	33.01
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	29.67	32.45
TraesCS3D01G457100.1	Wheat	cytosol	29.45	31.9
TraesCS3D01G456600.1	Wheat	cytosol	27.47	31.57
TraesCS3D01G456200.1	Wheat	cytosol	28.13	31.53
TraesCS3D01G456800.1	Wheat	cytosol	29.89	30.09
TraesCS3D01G455100.1	Wheat	cytosol	29.01	29.8
TraesCS7D01G484100.1	Wheat	cytosol	17.36	29.04
TraesCS6D01G082100.7	Wheat	cytosol	43.08	23.03

Protein Annotations

EnsemblPlants:TraesCS5D01G363100.1	EnsemblPlantsGene:TraesCS5D01G363100	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2

Description

No Description!

Coordinates

chr5D:-:441160857..441163668

Molecular Weight (calculated)

51639.8 Da

IEP (calculated)

8.692

GRAVY (calculated)

-0.149

Length

455 amino acids

Sequence
(BLAST)

001: MEGEKQPPPA VDSVSKVLDD EDLLVEILLR VAFPNTLVRA ALVCKRWLGH ASEPAFLRRF RELHPPRLLG FYINNNGYGH PPPPSFVPML PQPAELAAIV
101: RRTNFNAYRR LSTGTLDCRN GSVFIALYND KRTLGVHRPL CRGERGLTIL SSVPRPQLPF GTCCTFSQVV SKEGDGLSYY YLYVESTMGE SRLHVYMMQD
201: GSWHMHHLLD IGQLLRPRSK PKAVLVDNKI YMAAGPTNIV VLDLKTLSFS TVQLPQGVEH GSRGTTMLSR AGDASGVYLI HVKEFQLRIW LRKEDNWLLV
301: DSICLHEMCA NLRKSDSTIK NGHNVLLMDQ VVDYGDFVFL QMGGCVLHLD VRCRTLRKVY EYRSTHLGDI HPFTMIWPPA FPTVKYDPAR FVFWYFDDLV
401: ENCNLKKKDT RKLMDCTYVV NDMGGIKVGI SSHLLASKSY DSTAWLLNKF GEAQL

Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)

001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI

Arabidopsis Description

Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.