Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 54.36 | 59.71 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 34.9 | 57.35 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 30.43 | 52.31 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 13.87 | 40.52 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 33.78 | 38.62 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 30.87 | 37.81 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 33.78 | 37.56 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 31.77 | 36.04 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 32.21 | 36.0 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 31.54 | 35.79 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 31.32 | 34.91 |
| KXG30069 | Sorghum | cytosol, peroxisome, plasma membrane | 31.32 | 33.73 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 17.9 | 33.61 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 25.73 | 33.14 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 32.44 | 33.03 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 33.56 | 32.97 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 31.32 | 32.86 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 29.75 | 32.68 |
| Zm00001d015945_P001 | Maize | cytosol | 30.43 | 32.61 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 29.75 | 32.52 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 32.21 | 32.29 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 30.87 | 32.17 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 29.75 | 31.67 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 28.86 | 31.54 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 29.75 | 31.15 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 21.7 | 31.09 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 28.64 | 30.77 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 30.65 | 30.31 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 30.87 | 30.07 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 29.31 | 29.57 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 26.85 | 29.56 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 15.44 | 29.36 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 17.9 | 28.99 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 18.12 | 28.72 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 25.06 | 28.28 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 19.69 | 27.08 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 32.21 | 16.92 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G483700.1 | EnsemblPlantsGene:TraesCS7D01G483700 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7D:-:593665462..593666872
Molecular Weight (calculated)
49969.1 Da
IEP (calculated)
5.724
GRAVY (calculated)
-0.013
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLVRKFDCS RFRNQDGSVS GRGVNLNGLY ARTPEPHREL AKMEGESEPA AAAAVFSAVL DDDDLLGEIL ARVAFPTSFV RAALVCKRWL RLASAPAFLR
101: RFGDLHSPSL LGFYVVTRAH ASAEKQSPQF VPVPQPPELA AVARRASFNL DSLRGDWLRS EWFDLDCRNG LVHVFHGHGH PEVMVRSPLC PATYTAVLPP
201: VPSTSIHDGF TYYYHDILAN GGGQSYFCLA LGSKEQQPVW DVYVLQGDTW AIYSSVVPEI QEIALALNSL ISHDKMYNLA LVSGTFMLVL LDLPSSSLSL
301: VSLPEEVEYK STGMSLANDD SGVHLIHVKG SHLRIWLYDM TDKKGLADWL LVDTICLREI CVHQMISTRM FDDVGDPSLM VREVGVDSGF LFLEADGVLY
401: LFDIKRKELK KVYEVTQEDR YLYGVTPFMM VWPPKFPVMK EGCDPKE
101: RFGDLHSPSL LGFYVVTRAH ASAEKQSPQF VPVPQPPELA AVARRASFNL DSLRGDWLRS EWFDLDCRNG LVHVFHGHGH PEVMVRSPLC PATYTAVLPP
201: VPSTSIHDGF TYYYHDILAN GGGQSYFCLA LGSKEQQPVW DVYVLQGDTW AIYSSVVPEI QEIALALNSL ISHDKMYNLA LVSGTFMLVL LDLPSSSLSL
301: VSLPEEVEYK STGMSLANDD SGVHLIHVKG SHLRIWLYDM TDKKGLADWL LVDTICLREI CVHQMISTRM FDDVGDPSLM VREVGVDSGF LFLEADGVLY
401: LFDIKRKELK KVYEVTQEDR YLYGVTPFMM VWPPKFPVMK EGCDPKE
001: MDNQKGALFP DEVILQILAR LPVKSLFRFK SVCKSWYRLP SDKYFTSLFN QLSVKEQLLV AEVSDSSSLI CVDNLRGVSE LSLDFVRDRV RIRVSSNGLL
101: CCSSIPEKGV YYVCNPSTRE YRKLPKSRER PVTRFYPDGE ATLVGLACDL SKNKFNVVLA GYHRSFGQRP DGSFICLVFD SESNKWRKFV SVLEECSFTH
201: MSKNQVVFVN GMLHWLMSGL CYILALDVEH DVWRKISLPD EIRIGNGGGN RVYLLESDGF LSVIQLSDVW MKIWKMSEYE TETWSVVDSI SLRCIKGLVP
301: GIFPICQTGE YVFLATHKQV LVYQRRSKLW KEMFSVKGSS SLPLWFSAHA FRSTIVPCN
101: CCSSIPEKGV YYVCNPSTRE YRKLPKSRER PVTRFYPDGE ATLVGLACDL SKNKFNVVLA GYHRSFGQRP DGSFICLVFD SESNKWRKFV SVLEECSFTH
201: MSKNQVVFVN GMLHWLMSGL CYILALDVEH DVWRKISLPD EIRIGNGGGN RVYLLESDGF LSVIQLSDVW MKIWKMSEYE TETWSVVDSI SLRCIKGLVP
301: GIFPICQTGE YVFLATHKQV LVYQRRSKLW KEMFSVKGSS SLPLWFSAHA FRSTIVPCN
Arabidopsis Description
F-box protein At5g49610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGY4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.