Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G120300.1 | Wheat | cytosol | 57.56 | 91.95 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 66.39 | 90.29 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 22.27 | 34.64 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 41.6 | 28.53 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 39.92 | 24.3 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 42.86 | 23.78 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 39.5 | 23.38 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 39.08 | 23.19 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 38.66 | 22.6 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 37.82 | 22.5 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 39.92 | 22.3 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 39.92 | 22.25 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 41.6 | 22.2 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 35.71 | 21.57 |
| EES04945 | Sorghum | cytosol | 37.82 | 21.43 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 36.13 | 21.13 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 31.93 | 20.82 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 34.45 | 20.81 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 38.24 | 20.73 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 39.92 | 20.7 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 37.4 | 19.56 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 25.63 | 18.77 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 31.93 | 18.58 |
| Os02t0288925-00 | Rice | cytosol | 32.77 | 18.4 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 32.35 | 18.33 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 33.61 | 17.9 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 30.67 | 17.85 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 23.11 | 17.63 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 30.25 | 17.31 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 32.77 | 17.26 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 29.41 | 17.24 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 31.09 | 16.7 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 26.05 | 15.66 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 17.65 | 15.22 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 14.71 | 12.41 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 40.34 | 11.28 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 11.34 | 9.93 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 9.66 | 9.79 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G080600.1 | EnsemblPlantsGene:TraesCS6D01G080600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6D:+:46443319..46444145
Molecular Weight (calculated)
27089.8 Da
IEP (calculated)
6.833
GRAVY (calculated)
-0.076
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPVEIPHWF DPVPNSVCVD GKRLRQSAML VDPVSKVLDD DNLLIEILLL IGYPTTLIRA ALVCKRWFSH ASDPAFLCRF CKIHPPRLLG VYFKTRASRS
101: RFVPMLPQPP ENDAVISCAS SGLDAHKLML DDWNDIIFTK TFNNCNEEPG SIHIVRNPLC PARGMVIVPP FPCYGHQDSY FYKFYKLLFE EEGDSLSYFC
201: VQSELSNDGR KSTVYVYMLQ DGVWCLHASP TTQLPCRP
101: RFVPMLPQPP ENDAVISCAS SGLDAHKLML DDWNDIIFTK TFNNCNEEPG SIHIVRNPLC PARGMVIVPP FPCYGHQDSY FYKFYKLLFE EEGDSLSYFC
201: VQSELSNDGR KSTVYVYMLQ DGVWCLHASP TTQLPCRP
001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
Arabidopsis Description
F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.