Factsheet for TraesCS3D01G110900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G128100.1	Wheat	cytosol	58.04	95.4
TraesCS3A01G109100.1	Wheat	cytosol	92.31	93.84
TraesCS5D01G363300.1	Wheat	cytosol, nucleus, peroxisome	47.55	52.17
TraesCS5D01G497500.1	Wheat	cytosol	28.21	51.49
TraesCS6D01G027300.1	Wheat	cytosol	41.72	49.04
TraesCS3D01G449700.1	Wheat	cytosol	46.15	48.65
TraesCS6D01G027100.1	Wheat	cytosol	44.52	48.48
TraesCS3D01G449600.1	Wheat	cytosol	45.22	48.38
TraesCS6D01G023200.1	Wheat	cytosol	44.29	47.5
TraesCS2D01G057400.2	Wheat	cytosol	47.09	47.31
TraesCS6D01G055300.1	Wheat	cytosol	44.29	47.26
TraesCS6D01G069200.1	Wheat	cytosol	34.27	47.12
TraesCS3D01G449500.1	Wheat	cytosol	46.62	46.95
TraesCS6D01G027200.1	Wheat	cytosol	42.89	46.7
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	37.76	46.69
TraesCS3D01G449800.1	Wheat	cytosol, mitochondrion, plasma membrane	30.54	46.45
TraesCS6D01G044000.1	Wheat	cytosol	33.8	44.62
TraesCS5D01G363100.1	Wheat	cytosol	47.32	44.62
TraesCS6D01G027500.1	Wheat	cytosol	44.06	43.05
TraesCS6D01G080600.1	Wheat	cytosol	23.78	42.86
TraesCS1D01G065900.1	Wheat	cytosol	45.22	42.27
EES04945	Sorghum	cytosol	40.56	41.43
TraesCS6D01G080900.1	Wheat	cytosol	25.87	40.22
TraesCS2D01G064400.1	Wheat	cytosol	38.0	36.55
TraesCS7D01G484000.1	Wheat	cytosol, peroxisome, plastid	33.57	35.38
TraesCS3D01G456400.1	Wheat	cytosol, plastid	12.59	35.29
Os02t0288925-00	Rice	cytosol	34.73	35.14
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	33.33	34.38
TraesCS3D01G455200.1	Wheat	cytosol	30.54	32.03
TraesCS3D01G457100.1	Wheat	cytosol	30.54	31.19
TraesCS3D01G457000.1	Wheat	plasma membrane	29.6	31.05
TraesCS7D01G483700.1	Wheat	cytosol, mitochondrion	32.17	30.87
TraesCS3D01G456200.1	Wheat	cytosol	29.14	30.79
TraesCS3D01G456600.1	Wheat	cytosol	27.74	30.05
TraesCS7D01G484100.1	Wheat	cytosol	18.88	29.78
TraesCS3D01G455100.1	Wheat	cytosol	30.3	29.35
TraesCS3D01G456800.1	Wheat	cytosol	29.84	28.32
TraesCS6D01G082100.7	Wheat	cytosol	46.85	23.62

Protein Annotations

EnsemblPlants:TraesCS3D01G110900.2	EnsemblPlantsGene:TraesCS3D01G110900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SUPFAM:SSF81383	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3D:-:64475768..64478928

Molecular Weight (calculated)

49129.9 Da

IEP (calculated)

5.792

GRAVY (calculated)

-0.034

Length

429 amino acids

Sequence
(BLAST)

001: MLGPPDGSLL TEVAMEGEKQ PQPAVADSSA TVSKVLDDDN LLVEILLRVS FPNTLIRAAL VCRRWLCHVS DKAFLGRFRK LHPPRLLGFY IDTGMGPCFT
101: PMLPQPPELA AVIDRACFCP DTWQCRRAHV LDCRNGRVLT MLLDGPRFEL GVHTALCTLT ERGMMTFPPF PRYNRPEGRF CIWPCLISKE QGDDLSYFYV
201: LIESSEETSK VTVRVYMLQH GIWCTHHTLA TDQPSLPLWD PKLVLVDSKI YITVAPRNIM VLDLSVSSCS TICLPQGVEY GDRDAMLSRA DDASSVYLIQ
301: VKELQLHIWL HKGNNWLLVD TIFMSEMVAN LRMQDYTVED EHIDVLRILQ VGDNAEFVFF QMGRCILYLD IKGKTLRKVY EMKDKDWYSV YYIFPFKMVW
401: PPIFPALKPN LQVLLETESP SEEQYHPAQ

Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)

001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI

Arabidopsis Description

Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.