Factsheet for TraesCS3D01G449700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G496900.1	Wheat	cytosol	91.65	91.65
TraesCS3D01G449800.1	Wheat	cytosol, mitochondrion, plasma membrane	50.37	72.69
TraesCS3D01G449600.1	Wheat	cytosol	66.58	67.58
TraesCS3D01G449500.1	Wheat	cytosol	63.88	61.03
TraesCS5D01G497500.1	Wheat	cytosol	30.22	52.34
TraesCS5D01G363300.1	Wheat	cytosol, nucleus, peroxisome	47.17	49.1
TraesCS6D01G023200.1	Wheat	cytosol	47.91	48.75
TraesCS6D01G055300.1	Wheat	cytosol	46.93	47.51
TraesCS3D01G110900.2	Wheat	cytosol	48.65	46.15
TraesCS6D01G069200.1	Wheat	cytosol	35.14	45.83
TraesCS6D01G027300.1	Wheat	cytosol	40.05	44.66
TraesCS5D01G363100.1	Wheat	cytosol	49.39	44.18
TraesCS6D01G027500.1	Wheat	cytosol	47.17	43.74
TraesCS2D01G057400.2	Wheat	cytosol	45.21	43.09
TraesCS6D01G027100.1	Wheat	cytosol	41.28	42.64
TraesCS1D01G065900.1	Wheat	cytosol	46.68	41.39
TraesCS6D01G027200.1	Wheat	cytosol	40.05	41.37
TraesCS6D01G044000.1	Wheat	cytosol	32.92	41.23
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	34.89	40.92
EES04945	Sorghum	cytosol	41.52	40.24
TraesCS6D01G080600.1	Wheat	cytosol	22.6	38.66
TraesCS2D01G064400.1	Wheat	cytosol	40.05	36.55
TraesCS7D01G484000.1	Wheat	cytosol, peroxisome, plastid	35.63	35.63
Os02t0288925-00	Rice	cytosol	36.85	35.38
TraesCS3D01G456400.1	Wheat	cytosol, plastid	13.02	34.64
TraesCS6D01G080900.1	Wheat	cytosol	23.34	34.42
TraesCS3D01G455200.1	Wheat	cytosol	32.68	32.52
TraesCS7D01G484100.1	Wheat	cytosol	21.38	31.99
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	31.2	30.53
TraesCS3D01G457000.1	Wheat	plasma membrane	29.98	29.83
TraesCS3D01G457100.1	Wheat	cytosol	30.71	29.76
TraesCS7D01G483700.1	Wheat	cytosol, mitochondrion	32.68	29.75
TraesCS3D01G456200.1	Wheat	cytosol	28.75	28.82
TraesCS3D01G455100.1	Wheat	cytosol	30.96	28.44
TraesCS3D01G456600.1	Wheat	cytosol	26.78	27.53
TraesCS3D01G456800.1	Wheat	cytosol	30.22	27.21
TraesCS6D01G082100.7	Wheat	cytosol	47.67	22.8

Protein Annotations

EnsemblPlants:TraesCS3D01G449700.1	EnsemblPlantsGene:TraesCS3D01G449700	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr3D:+:557879046..557880494

Molecular Weight (calculated)

46267.9 Da

IEP (calculated)

6.007

GRAVY (calculated)

0.088

Length

407 amino acids

Sequence
(BLAST)

001: MQGEARLPPA CVSKVLDDDD LLAEIIVRVG FPTSLVRAAA VCRRWLSHAS DGAFLRRFRE LHPPRLLGFY IAEREYPAST RFFPMLHLPP ELAAVVHRAS
101: FRPDAYEGAH AHVVGCSNGS VFTHRASFYV DTFKLVFARH RPLCYERGMR MTILPGLKLR TSPGSMYSWA QLFSKQEEDG WSYFYLAVKD IMGAPGVLLY
201: VYMLQNGDDV WCLHLTLASD LYPYQSPKGV LLDNKIYLAT DDAIIVLDLT SSILSTIQPP HGVSFDVSGT TILSRADDGS VLYLIHIKEL QLQIWLHNGD
301: NWLLVDTICL SEMCANFLED EPTADIQINH VGDYNEFVFL EMGRCVLYLD VKHRTLRKVY KMTADEYYLG DIYPFMMSWP PIFPTLSPAR FAFCPFGDLY
401: SVLVEFT

Best Arabidopsis Sequence Match ( AT5G15710.1 )
(BLAST)

001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL

Arabidopsis Description

F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.