Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 51.49 | 42.91 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 42.98 | 36.59 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 61.7 | 33.96 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 43.4 | 32.69 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 43.83 | 31.69 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 51.91 | 30.42 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 54.89 | 30.28 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 52.34 | 30.22 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 48.94 | 29.41 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 49.79 | 29.25 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 33.19 | 28.68 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 51.49 | 28.21 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 46.81 | 27.36 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 44.26 | 26.4 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 94.47 | 26.15 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 40.43 | 26.03 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 48.51 | 25.97 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 43.4 | 25.89 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 47.66 | 24.62 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 45.96 | 23.53 |
| HORVU5Hr1G114130.1 | Barley | cytosol, nucleus, plastid | 87.66 | 22.84 |
| EES04945 | Sorghum | cytosol | 39.57 | 22.14 |
| Os02t0288925-00 | Rice | cytosol | 37.87 | 20.99 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 74.89 | 20.68 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 38.72 | 20.4 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 29.79 | 20.17 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 33.19 | 19.16 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 28.51 | 16.38 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 28.94 | 16.35 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 27.66 | 15.48 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 29.36 | 15.44 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 26.38 | 15.27 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 26.38 | 15.16 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 27.66 | 14.67 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 27.66 | 14.38 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 22.55 | 13.38 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 9.79 | 9.66 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G497500.1 | EnsemblPlantsGene:TraesCS5D01G497500 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5D:-:527601501..527603141
Molecular Weight (calculated)
26891.1 Da
IEP (calculated)
4.457
GRAVY (calculated)
-0.118
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLLLVEEA DGVSYFHVLL VANMQRTKYT VHVNMLRHGD GVWRTYLTFD RDQLLDPEWE SKAVLANNKI YIASTQNSID FFDLTTSSIS TVQLPHGVEY
101: GDRDTMLAPA DDASDVYLIH AKNLQLDIWL HKGDNWLLVD TISLRDMVAN LRIPGCEVED EPTAPLWINH VGSYAEFVFL EMGRCALHLD VKCRQLRKVY
201: DMTEEELDLG DIHPLTMIWP PIFPALTDNL ARNAM
101: GDRDTMLAPA DDASDVYLIH AKNLQLDIWL HKGDNWLLVD TISLRDMVAN LRIPGCEVED EPTAPLWINH VGSYAEFVFL EMGRCALHLD VKCRQLRKVY
201: DMTEEELDLG DIHPLTMIWP PIFPALTDNL ARNAM
001: MPFSAASSSS VSSIAEEPPP KKQHDPSPSC SSYLLLLPDE IILNCLARLP KCYYPVISLV SKTFRRLIAS PEIYVERSLL RRTERVLYVV LRSHATETPR
101: WYTLNFKPFG NDSNNHRLVP IPSFPSIPCW GMSIVAIDSE IYVLGGCIDN ELVSTGFVVE CPSHTCRLLP SMKQARGCAA VGFFDGKLYV IGGCNPLSVN
201: WVEAFDLKTQ TWESGLGVNN VEMHDLTIRS FAIDDKIYIM DRKNSFVYDP KEGTLETDEL LDTQWSVGSC VIDGKIYTFG SKNRIWVFDP IAMVWDRLKG
301: LDDLPDKRDG SRMSNLGGNL AIMFNLEKGS TKICCTEIRL ERREGGKIWG TVLWSNIVIT LKEPSTIVRC LTVTV
101: WYTLNFKPFG NDSNNHRLVP IPSFPSIPCW GMSIVAIDSE IYVLGGCIDN ELVSTGFVVE CPSHTCRLLP SMKQARGCAA VGFFDGKLYV IGGCNPLSVN
201: WVEAFDLKTQ TWESGLGVNN VEMHDLTIRS FAIDDKIYIM DRKNSFVYDP KEGTLETDEL LDTQWSVGSC VIDGKIYTFG SKNRIWVFDP IAMVWDRLKG
301: LDDLPDKRDG SRMSNLGGNL AIMFNLEKGS TKICCTEIRL ERREGGKIWG TVLWSNIVIT LKEPSTIVRC LTVTV
Arabidopsis Description
F-box/kelch-repeat protein At4g39240 [Source:UniProtKB/Swiss-Prot;Acc:Q9T031]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.