Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G497500.1 | Wheat | cytosol | 22.84 | 87.66 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 79.6 | 84.57 |
| HORVU6Hr1G002130.4 | Barley | plastid | 64.75 | 68.38 |
| HORVU0Hr1G014790.1 | Barley | endoplasmic reticulum, plasma membrane | 47.34 | 66.41 |
| HORVU6Hr1G016700.2 | Barley | cytosol, peroxisome, plastid | 20.95 | 46.44 |
| HORVU7Hr1G095850.1 | Barley | cytosol | 19.18 | 45.29 |
| HORVU6Hr1G018030.1 | Barley | cytosol | 19.96 | 41.28 |
| HORVU6Hr1G004190.1 | Barley | extracellular | 6.54 | 40.14 |
| EES04945 | Sorghum | cytosol | 17.63 | 37.86 |
| HORVU6Hr1G004080.1 | Barley | cytosol | 10.86 | 37.4 |
| Os02t0288925-00 | Rice | cytosol | 16.74 | 35.61 |
| HORVU3Hr1G099010.2 | Barley | cytosol | 14.63 | 31.65 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A287ST61 | InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G114130 | EnsemblPlants:HORVU5Hr1G114130.1 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF3 |
| SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF81383 | InterPro:Topless_fam | UniParc:UPI000B4648C8 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : |
Description
No Description!
Coordinates
chrchr5H:+:643180484..643218828
Molecular Weight (calculated)
101376.0 Da
IEP (calculated)
6.355
GRAVY (calculated)
-0.254
Length
902 amino acids
Sequence
(BLAST)
(BLAST)
001: QVIPQSCVHC QKRRRSEPSE RQKRGEAPPA TWIRPVAAWR SSCMIRESDH LMEQLSPTGH IPQPSRSLDD LPMKVACTLS HGSNVTSMDF HPSRHTLLLV
101: GSANGEFTLW EIGTSERLVT KPFEIWDMQA CSTQFQGVMA KDSSMAVNRV TWSPDGDLIG VASTKHLIHL HVYRHPNKIY QFVEIEAHSG GVNDIVFSRA
201: LTQLCVVTCG DDKLIRVWDM HGQKIYSFEG HTAPVYSICP HHIEQVQFIT STSVDGKMKT WLYDNLGSRL DFDVPGKWCS AMLYSADGTR LFSCGTSKEG
301: DTHLVEWNQS EGFVERSYSG FRKKPSGVAQ GVVQFDTARN HILAAGEDNQ IKFWDVDDTN MLACIEAGGG LPSYPRLRFN KEGNLLAVTT VECGFKILAN
401: TDGLRSLPAF GNVPSEVFRS PHEASEMKVS GPLVVGSISP NIGRTDHLDS KYPAKPSPKK LIGSDPAFGS VDKKLRISEE KSDKAKPWEL KGLQQFCVAT
501: MPETDQASKV SKVLDDDNLL REIIIRVGFP TTLVHAALVC KRWYQHASEP AFLRLFRERH PPCLLGFYLE NREDENIISI RFIPMLPQPS ELARVIRTVE
601: SYSWGFYHGA PANFLCSRKG KVLVNLYNKV KASKFTTRVH SPLCPESGLA VVPPLPHIGI RDDYYFSMND LLLMEEADGV TYIHVLLVAN TQRTKYTVLV
701: QVLRHGDGVW RTYLALERDQ ILDPEFEPRV VLANNKIYIA STQSSIDFLD LTTSSISEVQ LPQGVEYGDK DTMLAPADDD SGVYLIHAKN LQLDIWLHKG
801: DNWLLVDTIS LRDMIANLRI PGCEVEDEPT APLWINHVGP YADFVFLEMG RCALHLDVKC MQLRKVYDMT EEELDLGDIH PLTMIWPPIF PALEDNPARN
901: DM
101: GSANGEFTLW EIGTSERLVT KPFEIWDMQA CSTQFQGVMA KDSSMAVNRV TWSPDGDLIG VASTKHLIHL HVYRHPNKIY QFVEIEAHSG GVNDIVFSRA
201: LTQLCVVTCG DDKLIRVWDM HGQKIYSFEG HTAPVYSICP HHIEQVQFIT STSVDGKMKT WLYDNLGSRL DFDVPGKWCS AMLYSADGTR LFSCGTSKEG
301: DTHLVEWNQS EGFVERSYSG FRKKPSGVAQ GVVQFDTARN HILAAGEDNQ IKFWDVDDTN MLACIEAGGG LPSYPRLRFN KEGNLLAVTT VECGFKILAN
401: TDGLRSLPAF GNVPSEVFRS PHEASEMKVS GPLVVGSISP NIGRTDHLDS KYPAKPSPKK LIGSDPAFGS VDKKLRISEE KSDKAKPWEL KGLQQFCVAT
501: MPETDQASKV SKVLDDDNLL REIIIRVGFP TTLVHAALVC KRWYQHASEP AFLRLFRERH PPCLLGFYLE NREDENIISI RFIPMLPQPS ELARVIRTVE
601: SYSWGFYHGA PANFLCSRKG KVLVNLYNKV KASKFTTRVH SPLCPESGLA VVPPLPHIGI RDDYYFSMND LLLMEEADGV TYIHVLLVAN TQRTKYTVLV
701: QVLRHGDGVW RTYLALERDQ ILDPEFEPRV VLANNKIYIA STQSSIDFLD LTTSSISEVQ LPQGVEYGDK DTMLAPADDD SGVYLIHAKN LQLDIWLHKG
801: DNWLLVDTIS LRDMIANLRI PGCEVEDEPT APLWINHVGP YADFVFLEMG RCALHLDVKC MQLRKVYDMT EEELDLGDIH PLTMIWPPIF PALEDNPARN
901: DM
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
Arabidopsis Description
TPR1Topless-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.