Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G504300.1 | Wheat | cytosol | 83.69 | 84.1 |
| TraesCS3A01G461700.1 | Wheat | cytosol | 81.77 | 81.97 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 83.93 | 79.01 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 37.41 | 40.1 |
| HORVU6Hr1G016700.2 | Barley | cytosol, peroxisome, plastid | 33.33 | 34.15 |
| HORVU6Hr1G018030.1 | Barley | cytosol | 34.29 | 32.8 |
| HORVU7Hr1G095850.1 | Barley | cytosol | 28.78 | 31.41 |
| HORVU6Hr1G004190.1 | Barley | extracellular | 11.03 | 31.29 |
| Os04t0313500-00 | Rice | cytosol | 36.69 | 28.44 |
| HORVU6Hr1G004080.1 | Barley | cytosol | 17.03 | 27.1 |
| HORVU0Hr1G014790.1 | Barley | endoplasmic reticulum, plasma membrane | 28.54 | 18.51 |
| HORVU5Hr1G114130.1 | Barley | cytosol, nucleus, plastid | 31.65 | 14.63 |
| HORVU6Hr1G002130.4 | Barley | plastid | 29.26 | 14.29 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G099010.2 | EnsemblPlantsGene:HORVU3Hr1G099010 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | PFAM:PF00646 | SEG:seg |
| SUPFAM:SSF81383 | UniParc:UPI0002967867 | UniProt:M0WNJ8 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr3H:-:660605997..660610707
Molecular Weight (calculated)
45701.2 Da
IEP (calculated)
8.394
GRAVY (calculated)
0.035
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSHRRNPSP SLQKIPQNMD CDRRAPAASS VLGDDDLLRE ILIRLGFPNL LVRAALVSKR WLLHASDPVF LRRFRDRNPP RVLGVCAGYS ARPYKFVPLP
101: QPPELAALSR RAASSCADAF ALGGQRIEHC RNGRLIVDSL RRGTFNHSVL APLLSGEPEA VLPPIPPPGR HPGQPAQGAF THIFLPEDGG CNGITLVNLW
201: KVQREVRAEV YVLGAGGWGA PSTAVTEIEL QYAATFFAKM LPPVHGKVFM VTGFGYTLGL DLAAARFVML ELPAGVQYNY MLSCAEGSGI YLVTADRFQL
301: SVWLHQMTGD NHGAGGWLLV DTFSVLEACI RLAGDNWVSY EYVNVVVVGD NADFVFLDHP ASGVLFYVHR SSRVVKKVYQ RTADEHVCRG VAVRISPVMT
401: TWPPIFPALS IGHDQGE
101: QPPELAALSR RAASSCADAF ALGGQRIEHC RNGRLIVDSL RRGTFNHSVL APLLSGEPEA VLPPIPPPGR HPGQPAQGAF THIFLPEDGG CNGITLVNLW
201: KVQREVRAEV YVLGAGGWGA PSTAVTEIEL QYAATFFAKM LPPVHGKVFM VTGFGYTLGL DLAAARFVML ELPAGVQYNY MLSCAEGSGI YLVTADRFQL
301: SVWLHQMTGD NHGAGGWLLV DTFSVLEACI RLAGDNWVSY EYVNVVVVGD NADFVFLDHP ASGVLFYVHR SSRVVKKVYQ RTADEHVCRG VAVRISPVMT
401: TWPPIFPALS IGHDQGE
001: MEQQKQKKRK VVSKSKRTQS KSASSLPLDL TSEILLRLPE KSIARFRCVS KLWLSITTDP YFINLFETRS PRPSLLVCFI ENDKLFVSSI PQHLHSLQNS
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ
Arabidopsis Description
Putative F-box protein At1g47765 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.