Factsheet for Os04t0313500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G504400.1	Wheat	cytosol	29.18	38.39
TraesCS3D01G455200.1	Wheat	cytosol	28.25	37.16
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	16.91	37.14
TraesCS3B01G506300.1	Wheat	cytosol	27.88	37.04
TraesCS3B01G504300.1	Wheat	cytosol	28.44	36.87
EES04961	Sorghum	cytosol, peroxisome, plastid	26.58	36.76
HORVU3Hr1G099010.2	Barley	cytosol	28.44	36.69
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	28.44	36.43
TraesCS3D01G456200.1	Wheat	cytosol	27.32	36.21
TraesCS3D01G457100.1	Wheat	cytosol	28.25	36.19
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	27.88	36.06
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.14	35.7
TraesCS3B01G505900.1	Wheat	cytosol	26.95	35.63
TraesCS3D01G457000.1	Wheat	plasma membrane	26.95	35.45
Os02t0287800-00	Rice	cytosol	7.99	34.96
TraesCS3D01G456600.1	Wheat	cytosol	25.28	34.34
TraesCS3D01G455100.1	Wheat	cytosol	28.25	34.31
TraesCS1A01G415600.1	Wheat	cytosol	24.72	34.02
Os02t0288000-01	Rice	cytosol	25.09	32.77
Os02t0294100-01	Rice	cytosol, mitochondrion, nucleus, plastid	25.65	32.62
TraesCS3D01G456800.1	Wheat	cytosol	26.95	32.08
TraesCS3D01G456400.1	Wheat	cytosol, plastid	9.11	32.03
KXG29789	Sorghum	cytosol	25.28	32.0
EES06506	Sorghum	cytosol	23.79	31.92
KXG29787	Sorghum	cytosol	24.72	31.52
Zm00001d016394_P001	Maize	cytosol	25.46	31.21
Os02t0287900-01	Rice	cytosol	24.35	31.04
Os02t0288925-00	Rice	cytosol	21.93	27.83

Protein Annotations

EnsemblPlants:Os04t0313500-00	EnsemblPlantsGene:Os04g0313500	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	ProteinID:BAH92593.1	ProteinID:BAS88540.1	ProteinID:CAD40303.1
SEG:seg	SUPFAM:SSF81383	UniParc:UPI00001B1134	UniProt:Q7XW19	MapMan:35.2	:

Description

F-box protein 197Cyclin-like F-box domain containing protein. (Os04t0313500-00)

Coordinates

chr4:-:14264568..14266184

Molecular Weight (calculated)

58425.9 Da

IEP (calculated)

5.925

GRAVY (calculated)

-0.269

Length

538 amino acids

Sequence
(BLAST)

001: MEGEEESESW PPQLAPPSSP ASAVLSDEDL LGEILLRLES HDHLVAVAIV CKHWLRVASG ELFLRRFRVI HPPRLLGFCV DDGGGGDAGR RPQFKALPQH
101: PGVAAAAAHR TRHRFFGAFG HLAGYHRPSI ADCRDGRVLV ESPDRAPRRL GINTPYRYTV LRPPHPRESV QLLPPLPPPP GRGAGKHVVE RVFLPEDGGG
201: GGGDHGITLV YVLLVERRVT ARVHVLDSGG AWGAPTTAET ELPAPSCDDA VDTVLPPING DVYVVTTSGY TLGLRLGTTR FTVVELPDAA RSSANFRMAW
301: SHAAAAADDD DVARGRLCLV HGDGTRLSVW HRKTTTTEDD GGAAGVGWRL ADTFCVREAC ERIEWLPDGW WTGRVAVIAV GDNAEFALLD LENVGVVIYV
401: HLQWRTVKKV YERKLADADD GGGGGGDRQP PVRVFPLTTV WPPTFPELDK PRQNCCVRSP DGLVGGVVMT CHAGWSATSP SCSRRDGDDD DDDDEDVGAV
501: LPGCSWAGWF DDMAAMVAQL AEWAAQPRSP RRWRWSCL

Best Arabidopsis Sequence Match ( AT5G39090.1 )
(BLAST)

001: MNPSLNFIHV SRVTPSNSNS SASLTLPLTF FDLLWLKHKA VERVIFYKLT DVNRSLFDSV IVPNLKSSLS SSLSHYLPLA GHIIWEPHDP KPKIVYTQND
101: AVSFTVAESN SDFSLLTGKE PFSSTELHPL VPELQNSDDS AAVVSFQVTL FPNQGFCIGV TTHHAVSDGK TTTTFLKSWA HLCKHQDSSL PDDLIPFYDR
201: TVIKGPPEID TKVLKIWHSI HKPKSLKLLP RPEIESDVVR YTFELTRENI EKLRDKLKRE SSSFSSVRLS TFVITFSYVF TCLIGSGGDD PNRPVGYRFA
301: VDCRRLIDDP PIPLTYFGNC VYSAVKIPLD AGMFLGEQGF VVAARLISDS VEELDSNVAW KIPELLETYE KAPVDSQFVS VAGSTRFGIY GLDFGWGKPF
401: KSLLVSIDQR GKISIAESRD GSGGVEIGFS LKKQEMNVLI DLLHKGIK

Arabidopsis Description

Acyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FID1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.