Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06506 | Sorghum | cytosol | 64.92 | 71.07 |
| KXG29787 | Sorghum | cytosol | 68.11 | 70.85 |
| KXG29789 | Sorghum | cytosol | 67.43 | 69.65 |
| Zm00001d015945_P001 | Maize | cytosol | 26.42 | 27.82 |
| Os04t0313500-00 | Rice | cytosol | 31.21 | 25.46 |
Protein Annotations
| EMBL:BT033444 | EMBL:BT043396 | EnsemblPlants:Zm00001d016394_P001 | EnsemblPlants:Zm00001d016394_T001 | EnsemblPlantsGene:Zm00001d016394 | EntrezGene:100191372 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 |
| ProteinID:AQK70606.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI00017B6031 | UniProt:B4F8K6 | MapMan:35.2 |
Description
OSJNBa0087H01.6 protein; protein
Coordinates
chr5:+:160678198..160679517
Molecular Weight (calculated)
47618.8 Da
IEP (calculated)
5.244
GRAVY (calculated)
-0.044
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MCCNAKVSPL PVEMDTSASK VLTNDDLLHD ILLRLGCPSC LVSAALTSKC WLRGASDQVF ARDFCADHQP RLLGIYVSSG GISGSEFIPF RQPAGGSRPE
101: VSTVLNHADF GLGDLPAPSV WDCRNGMVLF QFGGETFNPA GLAARSPLLY PNMHESVVLP PSPQPSYFPE YPHAMLLPTD KGDDALCYRV DVRIWESHNK
201: AAALVWVLRS GSWHIRCIAA GVLAKSPAQI LPTTVLDGGK IYMATQAGYI LGLDLATARF FIVDLPRGVE LDQYPGNLVH CRGDDSVLYL FHVDGDNRLN
301: VWLRRMEDDQ KGHGGPGAAG GSAGATKGWV LRDTISVRET CGHLVEQGWE KAGDGDEDAA AVMIVGAGDN AEFVFLELGV TGVVAYMHVK TREVKQVYQR
401: QPDDDHFISV RPFMLVKPPV FPVLEDAHEG EAAAALHQE
101: VSTVLNHADF GLGDLPAPSV WDCRNGMVLF QFGGETFNPA GLAARSPLLY PNMHESVVLP PSPQPSYFPE YPHAMLLPTD KGDDALCYRV DVRIWESHNK
201: AAALVWVLRS GSWHIRCIAA GVLAKSPAQI LPTTVLDGGK IYMATQAGYI LGLDLATARF FIVDLPRGVE LDQYPGNLVH CRGDDSVLYL FHVDGDNRLN
301: VWLRRMEDDQ KGHGGPGAAG GSAGATKGWV LRDTISVRET CGHLVEQGWE KAGDGDEDAA AVMIVGAGDN AEFVFLELGV TGVVAYMHVK TREVKQVYQR
401: QPDDDHFISV RPFMLVKPPV FPVLEDAHEG EAAAALHQE
001: MAATVAEYAT AKSLALLDTE NREVLNSFDA IFTHGNTDQV APLDEPLVFN RFGLSHISAK DTHQPKTDVD ESAKADFAGA KTSVWWDIEN CEVPKGCDPH
101: GVAQSIRSVL SKSNFCGPLT IYAYGDTNQI PSSVQQALSS TGVSLNHVPA VSNGLIILYV LDDGEHLTGV KDGSDKKLLV DIMLWAMDNQ APANIMLISG
201: DKDFSYLLHK LGMKRYNILL ARPEKASTPL IAAAKTVWLW TSIFNGDCPN IPIDLTTRRH HHDSAYEVSR HLGPKQAQGT KRGRSFCELC NVSCSNHDLT
301: AHLSGRRHRA NVELVARGRP LVSNSTEPKY AWCRVCRLRF RSQASYETHI LGKSHQEKLE DQNEHSKKRI CRTP
101: GVAQSIRSVL SKSNFCGPLT IYAYGDTNQI PSSVQQALSS TGVSLNHVPA VSNGLIILYV LDDGEHLTGV KDGSDKKLLV DIMLWAMDNQ APANIMLISG
201: DKDFSYLLHK LGMKRYNILL ARPEKASTPL IAAAKTVWLW TSIFNGDCPN IPIDLTTRRH HHDSAYEVSR HLGPKQAQGT KRGRSFCELC NVSCSNHDLT
301: AHLSGRRHRA NVELVARGRP LVSNSTEPKY AWCRVCRLRF RSQASYETHI LGKSHQEKLE DQNEHSKKRI CRTP
Arabidopsis Description
Putative endonuclease or glycosyl hydrolase [Source:TAIR;Acc:AT5G61180]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.