Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06506 | Sorghum | cytosol | 88.39 | 93.02 |
| KXG29789 | Sorghum | cytosol | 71.09 | 70.59 |
| Zm00001d016394_P001 | Maize | cytosol | 70.85 | 68.11 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 28.2 | 30.59 |
| EES11456 | Sorghum | cytosol | 27.73 | 29.1 |
| KXG30069 | Sorghum | cytosol, peroxisome, plasma membrane | 27.49 | 27.95 |
| EES04945 | Sorghum | cytosol | 27.73 | 27.86 |
| Os04t0313500-00 | Rice | cytosol | 31.52 | 24.72 |
Protein Annotations
| EnsemblPlants:KXG29787 | EnsemblPlantsGene:SORBI_3004G090000 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | ProteinID:KXG29787 | ProteinID:KXG29787.1 |
| SEG:seg | UniParc:UPI0007F24467 | UniProt:A0A194YNL8 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr4:-:7633531..7635140
Molecular Weight (calculated)
45807.5 Da
IEP (calculated)
4.592
GRAVY (calculated)
-0.068
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSPTSAKK GTSDSNVLTN GDLLQKILLR LGCPSSLVSA ALTSKLWLHG ASKQAGYPPG LLGIYVSSAG ITSSEFIPLL QPDASSPEAS AVLADFGFGN
101: LPTPNVWDCR NGVVLFEFGG NGETFHHAGL AVRSPLLYPD MDKPTVLPQA PQLLTFSEYP HDMLLPADHG DGTLCYRVDV RTSESKNMVT VVVCVLRSDS
201: WAVHCIATGS LAKSPIQILP TTVLAGGKIY MATQAGYILG LDLGKEEFFI VDLPKGVELD QYPGNLVHCR GDDYVLYLFH VDSENRLNVW LRKMKDDHEH
301: DDASTGSGSA NNGWVLKDSI SVRETCGHLM EQEGWETIGD GDEDAAVVTV VGAGDNAEFV FLELGITGII VCMHLKTREV KKVYQREPDD DYLISVPPFM
401: FVRPPILPVQ DAHEGEATPH QE
101: LPTPNVWDCR NGVVLFEFGG NGETFHHAGL AVRSPLLYPD MDKPTVLPQA PQLLTFSEYP HDMLLPADHG DGTLCYRVDV RTSESKNMVT VVVCVLRSDS
201: WAVHCIATGS LAKSPIQILP TTVLAGGKIY MATQAGYILG LDLGKEEFFI VDLPKGVELD QYPGNLVHCR GDDYVLYLFH VDSENRLNVW LRKMKDDHEH
301: DDASTGSGSA NNGWVLKDSI SVRETCGHLM EQEGWETIGD GDEDAAVVTV VGAGDNAEFV FLELGITGII VCMHLKTREV KKVYQREPDD DYLISVPPFM
401: FVRPPILPVQ DAHEGEATPH QE
001: MPSSATSTYL LSLKQVSLTA SSPLLLQLKD RFFHQPKLLN MGFSTGKRKS RDEEEDRVSF FASEFPMDDL NDDVLERVLS WLPTSCFFRM SSVCKRWKSS
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
101: QTSKSFKLAC SQIPTRDPWF FMIDNDSNSS SFVFDSTENS WKNLNRRDFL HHHRQDFIPV ASSGGLLCYR CSISGDFLLR NPLTGSSRDI PSQDNNNNKP
201: LQAVAMTTTT VTPSSYTLVT ISGEIPNLSF KIYESNADSW SKDQELESVK NNDSSLHDDY DTDSGTVYFL SKQGNVVVAS NNLQRSPSKQ YSSVITVTDE
301: AEIVYFLSSY GTIVACDLTK RCFTELPKLL PPFLEYSIDL VECEGTMYVI LLSEFFESAS LRIWRLDNNR EWVQVGMLPP ALSHELYGKK GDINCVGGAG
401: NKILVCFNAS PPEVYCRYFV YDLVAEEWNE LPKCFKDGEA VDFVSALSFQ PRIEATV
Arabidopsis Description
F-box family protein [Source:TAIR;Acc:AT4G33160]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.