Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29787 | Sorghum | cytosol | 93.02 | 88.39 |
| KXG29789 | Sorghum | cytosol | 71.57 | 67.53 |
| Zm00001d016394_P001 | Maize | cytosol | 71.07 | 64.92 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 28.93 | 29.82 |
| EES11456 | Sorghum | cytosol | 27.68 | 27.61 |
| EES04945 | Sorghum | cytosol | 27.93 | 26.67 |
| KXG30069 | Sorghum | cytosol, peroxisome, plasma membrane | 27.43 | 26.51 |
| Os04t0313500-00 | Rice | cytosol | 31.92 | 23.79 |
Protein Annotations
| EnsemblPlants:EES06506 | EnsemblPlantsGene:SORBI_3004G090200 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | ProteinID:EES06506 | ProteinID:EES06506.1 |
| RefSeq:XP_002453530.1 | SEG:seg | UniParc:UPI0001A85D2B | UniProt:C5XY10 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr4:-:7644871..7646129
Molecular Weight (calculated)
43789.2 Da
IEP (calculated)
4.685
GRAVY (calculated)
-0.166
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSPTSAKK DTSNSNVLTN GDLLQKILLR LGCPRSLVSA ALTSKRWLHG ASKQVGHPPG LLGIYVSSAG ITSSEFIPLL QLDASSPEAS AILADFGFGN
101: LPTPNVWDCR NGVVLFEFGG DGETFHHGGL AVRSPLLYPD MDKPTVLPQA PQLPTFSEYP HAMLLPADHG DGALCYRVDV RTNESKNMVT VVSPIQILPT
201: TVLVGGKIYM ATQAGYILGL DLGKEEFFIV DLPKGMELDQ YPGNLVHGRG DDSVLYLFHV DRKNRLNVWL RKMKDDHEHD DASTGSGSAN NGWVLRDTIS
301: VRETCGHLME QEGLETIGDG DEDADVVTVV GAGDNAEFVF LELGVTGIIV CMHLKTREVK QVYQREPDDD YLISVRPFMF VRPPILPVQD AHEGEATPQQ
401: E
101: LPTPNVWDCR NGVVLFEFGG DGETFHHGGL AVRSPLLYPD MDKPTVLPQA PQLPTFSEYP HAMLLPADHG DGALCYRVDV RTNESKNMVT VVSPIQILPT
201: TVLVGGKIYM ATQAGYILGL DLGKEEFFIV DLPKGMELDQ YPGNLVHGRG DDSVLYLFHV DRKNRLNVWL RKMKDDHEHD DASTGSGSAN NGWVLRDTIS
301: VRETCGHLME QEGLETIGDG DEDADVVTVV GAGDNAEFVF LELGVTGIIV CMHLKTREVK QVYQREPDDD YLISVRPFMF VRPPILPVQD AHEGEATPQQ
401: E
001: MGEEEENPNS IDILPELLEE VLLRLPTKSI LKCRIVSKQW RSLLESSRFA ERHMSLQNSR RRILAAYNCD CGGRRKLLPE SRFEGDEEIV YLHCDASRPS
101: MTCQGVICFP EQDWIIVLNP STSQLRRFPS GLNHNCRFRI GLWKTFSPGN WVMGFGRDKV NGRYKVVRMS FAFWRVRQEE PVVECGVLDV DTGEWRKLSP
201: PPYVVNVGSK SVCVNGSIYW LHIQTVYRIL ALDLHKEEFH KVPVPPTQIT VDTQMVNLED RLVLAITRVS PEWILEVWGM DTYKEKWSKT YSISLDHRVV
301: SWRRQKRWFT PVAVSKQANL VFYDNKKRLF KYYPVKDEIR CLSLDICVLS PYVENLVPLP LKPSHPHPTP KNSDFEMRIS RCRLFSTPGS WISKILKWNV
401: MTLEILFTSL AIVGYICLPL
101: MTCQGVICFP EQDWIIVLNP STSQLRRFPS GLNHNCRFRI GLWKTFSPGN WVMGFGRDKV NGRYKVVRMS FAFWRVRQEE PVVECGVLDV DTGEWRKLSP
201: PPYVVNVGSK SVCVNGSIYW LHIQTVYRIL ALDLHKEEFH KVPVPPTQIT VDTQMVNLED RLVLAITRVS PEWILEVWGM DTYKEKWSKT YSISLDHRVV
301: SWRRQKRWFT PVAVSKQANL VFYDNKKRLF KYYPVKDEIR CLSLDICVLS PYVENLVPLP LKPSHPHPTP KNSDFEMRIS RCRLFSTPGS WISKILKWNV
401: MTLEILFTSL AIVGYICLPL
Arabidopsis Description
F-box and associated interaction domains-containing protein [Source:TAIR;Acc:AT2G43260]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.