Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06506 | Sorghum | cytosol | 67.53 | 71.57 |
| KXG29787 | Sorghum | cytosol | 70.59 | 71.09 |
| Zm00001d016394_P001 | Maize | cytosol | 69.65 | 67.43 |
| EES11456 | Sorghum | cytosol | 28.94 | 30.6 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 27.29 | 29.82 |
| EES04945 | Sorghum | cytosol | 27.06 | 27.38 |
| KXG30069 | Sorghum | cytosol, peroxisome, plasma membrane | 25.65 | 26.27 |
| Os04t0313500-00 | Rice | cytosol | 32.0 | 25.28 |
Protein Annotations
| EnsemblPlants:KXG29789 | EnsemblPlantsGene:SORBI_3004G090300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | ProteinID:KXG29789 | ProteinID:KXG29789.1 | SEG:seg | SUPFAM:SSF81383 |
| UniParc:UPI0003C6E362 | UniProt:A0A194YNJ0 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:7670976..7672253
Molecular Weight (calculated)
47310.5 Da
IEP (calculated)
4.737
GRAVY (calculated)
-0.107
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSNTVELPP SPPEEDTSAS NVLTNEDLLD NILLRLKCRS CLVSAALTSK RWLRVASGLF IPDFCASHQP RLLGVYVSSC DDLSSSEFIP LLQPDVVNHA
101: NFGFGNLPAP NVWDCRNGFV LFEFGGETLH HTGIAVCSPL IYPSMDRVMV LPRPPQPPCF PEYPHAMLLP TDHGDDALCY RINVRTWESS YDTVTVMVCV
201: LRLGSWVIQC IATDRLAKSP GQILPTTVLS DGKIYMATQA GYILGLNPIK KAFFIIDLPK GVEHDQYPGN FVHCRGDNSV LYLIHVDGDN MLNVWLRKMN
301: DDHGHNDTSA ASGSANGWVL RDTISMRETC GHLMEQGWET TDDEDEDAAA IMVTGAGDNA EFVFLELGIT GVIIYMHLKT REVKQVYKRE PDNDYLISVR
401: PFMFVRPPIF PVQDAHECEA APHQE
101: NFGFGNLPAP NVWDCRNGFV LFEFGGETLH HTGIAVCSPL IYPSMDRVMV LPRPPQPPCF PEYPHAMLLP TDHGDDALCY RINVRTWESS YDTVTVMVCV
201: LRLGSWVIQC IATDRLAKSP GQILPTTVLS DGKIYMATQA GYILGLNPIK KAFFIIDLPK GVEHDQYPGN FVHCRGDNSV LYLIHVDGDN MLNVWLRKMN
301: DDHGHNDTSA ASGSANGWVL RDTISMRETC GHLMEQGWET TDDEDEDAAA IMVTGAGDNA EFVFLELGIT GVIIYMHLKT REVKQVYKRE PDNDYLISVR
401: PFMFVRPPIF PVQDAHECEA APHQE
001: MEEKSKSRGW CGWFIAIIVL ASVILAVVYT VKLRTKKSGD DDGGGPVPGP PGAIDKKYAD ALKLALQFFD IQKSGKLENN KIPWRGDSGL KDGSEDNLDL
101: SKGLYDAGDH IKFGFPMAFT ATVLSWSILE YGDQMNAVNQ LDPAKDSLRW ITDYLIKAHP SDNVLYIQVG DPKVDHPCWE RPEDMKEKRP LTKIDVDTPG
201: TEVAAETAAA MASASLVFKD SDPTYSATLL KHAKQLFNFA DTKRGSYSVN IPEVQKFYNS TGYGDELLWA ASWLYHATED KTYLDYVSNH GKEFASFGNP
301: TWFSWDNKLA GTQVLLSRLL FFKKDLSGSK GLGNYRNTAK AVMCGLLPKS PTSTASRTNG GLIWVSEWNS MQQSVSSAFL ASLFSDYMLT SRIHKISCDG
401: KIFKATELRD FAKSQADYML GKNPLGTSFV VGYGDKYPQF VHHRGASIPA DATTGCLDGF KWFNSTKPNP NIAYGALVGG PFFNETFTDS RENPMQNEPT
501: TYNNALLVGL LSSLVTTSST LQSLK
101: SKGLYDAGDH IKFGFPMAFT ATVLSWSILE YGDQMNAVNQ LDPAKDSLRW ITDYLIKAHP SDNVLYIQVG DPKVDHPCWE RPEDMKEKRP LTKIDVDTPG
201: TEVAAETAAA MASASLVFKD SDPTYSATLL KHAKQLFNFA DTKRGSYSVN IPEVQKFYNS TGYGDELLWA ASWLYHATED KTYLDYVSNH GKEFASFGNP
301: TWFSWDNKLA GTQVLLSRLL FFKKDLSGSK GLGNYRNTAK AVMCGLLPKS PTSTASRTNG GLIWVSEWNS MQQSVSSAFL ASLFSDYMLT SRIHKISCDG
401: KIFKATELRD FAKSQADYML GKNPLGTSFV VGYGDKYPQF VHHRGASIPA DATTGCLDGF KWFNSTKPNP NIAYGALVGG PFFNETFTDS RENPMQNEPT
501: TYNNALLVGL LSSLVTTSST LQSLK
Arabidopsis Description
AtGH9B7Endoglucanase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCP6]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.