Factsheet for Os02t0294100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0288000-01	Rice	cytosol	43.03	44.17
Os02t0287800-00	Rice	cytosol	12.77	43.9
Os02t0287900-01	Rice	cytosol	43.5	43.6
EES11456	Sorghum	cytosol	41.13	43.28
Os02t0288925-00	Rice	cytosol	35.46	35.38
Os04t0313500-00	Rice	cytosol	32.62	25.65

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.2	EntrezGene:4329070	EMBL:AK106048	ProteinID:BAF08517.1	ProteinID:BAS78213.1
ProteinID:EAZ22670.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031146	InterPro:IPR001810
EnsemblPlantsGene:Os02g0294100	EnsemblPlants:Os02t0294100-01	PFAM:PF00646	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	UniProt:Q0E1X1
SUPFAM:SSF81383	UniParc:UPI0000DF0674	RefSeq:XP_015627202.1	RefSeq:XP_015627203.1	RefSeq:XP_015627204.1	RefSeq:XP_015627205.1
RefSeq:XP_015627206.1	SEG:seg	:	:	:	:

Description

F-box protein 82Cyclin-like F-box domain containing protein. (Os02t0294100-01);Cyclin-like F-box domain containing protein. (Os02t0294100-02)

Coordinates

chr2:-:11188432..11193873

Molecular Weight (calculated)

47075.8 Da

IEP (calculated)

7.216

GRAVY (calculated)

-0.059

Length

423 amino acids

Sequence
(BLAST)

001: MDRKRPRPPQ PSPPPPVASS AASSSSSSVL DDGDLLREIL LRLAHPTFLV RAALVCRRWL RHASDRAFLR RFAVLHPPRL LGFYVDSASL PRPRFVPLPH
101: PPELAAVVRR GSFDLGTAAD LHFHLGTGIY CCRNGRLLVC HRGGGESTLQ LRRPLHPASD GAVISTFRTP PRPLPPNQRH TRYILLPEDG GDGDGDAVAC
201: TVVTLVSSER EVFAKVEKIL RAGVWDVAQT SAPIELPAHW RRSLSRGFLV NGKLYMLGTT GYILGLELVS MSLFFIEVPD AVRDDCPESF QLSVKLSQAE
301: KSGLYLIHVE GFKIHVWLHG TDGNSSADWN LVNTICLREV FGHLVKPSWE SGDSRISLPG SGDNAEFVFL EVDGEVFCMD IISRTVEKVY EMAMKDDFLF
401: EIYPFMMVWP PIFPALIKTH EPE

Best Arabidopsis Sequence Match ( AT5G15710.1 )
(BLAST)

001: MERLGFWGLL MGSVEKSLDS GNSLACSASA KNGDEESSTS SKQVSPLKGS GSRNTSPLGR VGSRNTSPSR QKVVKTKPRG LEEETVASFG KQVVADVQME
101: DGIWAMLPED LLNEILARVP PFMIFRIRSV CKKWNLILQD NSFLKFHSNV SSHGPCLLTF WKNSPQIPQC SVFSLPLKTW YKIPFTFLPP WAFWLVGSSG
201: GLVCFSGLDG LTFRTLVCNP LMQSWRTLPS MHYNQQRQLI MVVDRSDKSF KVIATSDIYG DKSLPTEVYD SKTDKWSLHQ IMPAVNLCSS KMAYCDSRLY
301: LETLSPLGLM MYRLDSGQWE HIPAKFPRSL LDGYLVAGTQ KRLFLVGRIG LYSTLQSMRI WELDHTKVSW VEISRMPPKY FRALLRLSAE RFECFGQDNL
401: ICFTSWNQGK GLLYNVDKKI WSWISGCALQ SCNSQVCFYE PRFDASVL

Arabidopsis Description

F-box/kelch-repeat protein At5g15710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFV5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.