Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0288000-01 | Rice | cytosol | 57.82 | 59.22 |
| Os02t0294100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 43.6 | 43.5 |
| EES11456 | Sorghum | cytosol | 39.57 | 41.54 |
| Os02t0287800-00 | Rice | cytosol | 11.61 | 39.84 |
| Os02t0288925-00 | Rice | cytosol | 34.6 | 34.43 |
| Os04t0313500-00 | Rice | cytosol | 31.04 | 24.35 |
Protein Annotations
| EMBL:AK106386 | EnsemblPlants:Os02t0287900-01 | EnsemblPlantsGene:Os02g0287900 | EntrezGene:4329043 | Gene3D:1.20.1280.50 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf | PANTHER:PTHR31264 | PANTHER:PTHR31264:SF10 | ProteinID:BAF08493.1 |
| ProteinID:BAS78164.1 | RefSeq:XP_015624698.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0000DF066D | UniProt:Q0E1Z5 |
| MapMan:35.2 | : | : | : | : | : |
Description
F-box protein 80Cyclin-like F-box domain containing protein. (Os02t0287900-01)
Coordinates
chr2:-:10857586..10859012
Molecular Weight (calculated)
47176.4 Da
IEP (calculated)
5.182
GRAVY (calculated)
-0.255
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMEDEATRP SSPPPAASAA SSVLADDDLL REILLRLAFP TTLVRAALVS SRWLGLASDS SFLRRFRARN PPRLLGFYHT ARRDEQPAFV PLPQPPELAP
101: VLRRLGGFAL GGADVSAVVF DCRNGRLLRA EFPPPPDELR FGVVSPLLPP ARKPPDLPPN LHSQLHQVPN DARVLRPGWM LLPEEEEDDG GDDLSYTLVV
201: LIRRGRGLFA RAVLVRGESD DQIRTSDSIE LPNHYWPNKK MNRGLLFHGS LYMLGREHVL GLNLASMSLF LIKLPDGVEQ LEHMGNLELL RDGDSGLYLA
301: HLKGFQIHVW HRATDGGGNG GDWEMVDTMS LHQSFGQVAR PDWESGDPSL GDALVSLRRV EDNAELFLTI DRVIFHIHIA SRTANKVFEM APKEDIGFEI
401: FPFMMIWPPT FPALNYDDDD DQ
101: VLRRLGGFAL GGADVSAVVF DCRNGRLLRA EFPPPPDELR FGVVSPLLPP ARKPPDLPPN LHSQLHQVPN DARVLRPGWM LLPEEEEDDG GDDLSYTLVV
201: LIRRGRGLFA RAVLVRGESD DQIRTSDSIE LPNHYWPNKK MNRGLLFHGS LYMLGREHVL GLNLASMSLF LIKLPDGVEQ LEHMGNLELL RDGDSGLYLA
301: HLKGFQIHVW HRATDGGGNG GDWEMVDTMS LHQSFGQVAR PDWESGDPSL GDALVSLRRV EDNAELFLTI DRVIFHIHIA SRTANKVFEM APKEDIGFEI
401: FPFMMIWPPT FPALNYDDDD DQ
001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
Arabidopsis Description
F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.