Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0287900-01 | Rice | cytosol | 59.22 | 57.82 |
| Os02t0294100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 44.17 | 43.03 |
| Os02t0287800-00 | Rice | cytosol | 12.62 | 42.28 |
| EES11456 | Sorghum | cytosol | 39.08 | 40.05 |
| Os02t0288925-00 | Rice | cytosol | 30.83 | 29.95 |
| Os04t0313500-00 | Rice | cytosol | 32.77 | 25.09 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.2 | EntrezGene:4329044 | EMBL:AK109705 | ProteinID:BAD21718.1 | ProteinID:BAF08494.1 |
| ProteinID:BAS78165.1 | ProteinID:EAZ22624.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031146 |
| InterPro:IPR001810 | EnsemblPlantsGene:Os02g0288000 | EnsemblPlants:Os02t0288000-01 | PFAM:PF00646 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 |
| UniProt:Q6K8B1 | SUPFAM:SSF81383 | UniParc:UPI0000377CA6 | RefSeq:XP_015623912.1 | SEG:seg | : |
Description
F-box protein 81Cyclin-like F-box domain containing protein. (Os02t0288000-01)
Coordinates
chr2:-:10861422..10862862
Molecular Weight (calculated)
46178.7 Da
IEP (calculated)
6.709
GRAVY (calculated)
-0.120
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDKGTQPPE PAAAAAISSV LANDDLLREI LLRLGLPTTL VRAALVSTRW LRLASDPAFL RRFRARHPPR LLGFYHTARA RFQDEVPAFV PLPQPPELAA
101: ALRGARLRLA PGSSGSGPDA PVILSCRNGR VLAAEFPPDG PRVSIISPMH PARHPPALPL VYELPRQPGQ ILHASCMLLF PDVGSDDPSY TFVEFLRKDQ
201: EMLAKAVSVR AEISDLNSVR ESATIEIQES WERSIRRDVL VNGNLYLLGG KGHVLGLNLA SMRLFLFRLP DGVQQLHRMG NIELLRAGDS GLYLIHLKGF
301: QIHVWFRASD SDIGGGNWEL VDNICLGESF GQFAEPNWES GDALVALHRV EDNAEVFLRV DRVIFHIHIM NRTVNKVFEM SPEAYRYFDI FPFMMLWPPT
401: FPQLRNDHDQ DQ
101: ALRGARLRLA PGSSGSGPDA PVILSCRNGR VLAAEFPPDG PRVSIISPMH PARHPPALPL VYELPRQPGQ ILHASCMLLF PDVGSDDPSY TFVEFLRKDQ
201: EMLAKAVSVR AEISDLNSVR ESATIEIQES WERSIRRDVL VNGNLYLLGG KGHVLGLNLA SMRLFLFRLP DGVQQLHRMG NIELLRAGDS GLYLIHLKGF
301: QIHVWFRASD SDIGGGNWEL VDNICLGESF GQFAEPNWES GDALVALHRV EDNAEVFLRV DRVIFHIHIM NRTVNKVFEM SPEAYRYFDI FPFMMLWPPT
401: FPQLRNDHDQ DQ
001: MSCSARLKTN LGMTSALSTH EVLNSNDTMC EILILLPPET IYKLILVSKR WLEIIASPCF RHTYLAKWKP NFELIGFFVC SSMYLGRRID GTRRPRAEPS
101: LPLLSTSSIG DEIESSGILK KLGYYIDSAD GLLLCGRHPK AYYLWDPSTQ KQQQLPRPRV HFEELCMSLI SEDSPDQGFS YKVVRAECVA FPVNSTKVKV
201: ETFSSKTSTW SYSELICLEP LSLSPWTPGR VIKGVVYWHA RGGKIAIYDS NSEEKRIDVI KLPKTYDYDE QVLGETDDGS LQYGWSNKSV MEVWKLEKVG
301: NVLEWNLLFK VNFKAMWKMN QAVATRFSTW TKETQLLALF NQKSDLVYIR CDTQIFIYHT ETKRVEVVQY QGRKSTLVWD FNKVVPYFRR TWPCSPLFEN
401: NAMMIDTPQC NASSAGSN
101: LPLLSTSSIG DEIESSGILK KLGYYIDSAD GLLLCGRHPK AYYLWDPSTQ KQQQLPRPRV HFEELCMSLI SEDSPDQGFS YKVVRAECVA FPVNSTKVKV
201: ETFSSKTSTW SYSELICLEP LSLSPWTPGR VIKGVVYWHA RGGKIAIYDS NSEEKRIDVI KLPKTYDYDE QVLGETDDGS LQYGWSNKSV MEVWKLEKVG
301: NVLEWNLLFK VNFKAMWKMN QAVATRFSTW TKETQLLALF NQKSDLVYIR CDTQIFIYHT ETKRVEVVQY QGRKSTLVWD FNKVVPYFRR TWPCSPLFEN
401: NAMMIDTPQC NASSAGSN
Arabidopsis Description
F-box protein At5g03970 [Source:UniProtKB/Swiss-Prot;Acc:Q94A64]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.