Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G456600.1 | Wheat | cytosol | 78.78 | 48.74 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 62.86 | 36.67 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 59.59 | 35.18 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 55.51 | 33.58 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 55.1 | 33.17 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 54.69 | 32.76 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 54.29 | 32.52 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 28.98 | 28.06 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 28.57 | 26.82 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 25.71 | 24.9 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 26.12 | 24.62 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 34.29 | 21.59 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 27.76 | 21.59 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 29.39 | 18.27 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 29.39 | 18.27 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 31.02 | 18.27 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 27.35 | 16.96 |
| Os04t0313500-00 | Rice | cytosol | 37.14 | 16.91 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 27.76 | 16.87 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 27.35 | 16.75 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 28.57 | 16.67 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 28.98 | 16.59 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 30.2 | 16.02 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 26.53 | 15.97 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 26.94 | 15.6 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 25.71 | 15.48 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 28.16 | 15.3 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 25.71 | 15.14 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 28.57 | 15.02 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 22.45 | 14.78 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 24.08 | 14.64 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 25.31 | 7.3 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 26.53 | 6.83 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 0.82 | 1.14 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 0.41 | 0.67 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G505600.1 | EnsemblPlantsGene:TraesCS3B01G505600 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3B:+:749680808..749681545
Molecular Weight (calculated)
27252.2 Da
IEP (calculated)
8.219
GRAVY (calculated)
0.203
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFLTEDGSR GGITLVYLWQ VQRKVRAEVY VLGSGGWGFP ATAMTEVPNP AAFLTKMLPP VRGKVFMVTS FGCILGLDLA AARFLMLELP AGIGRNYMLS
101: SAEGSGIYLV NADGFQLSVW LHRMMSNSDG ASGWLLVDTF CVREAYSSAG HNWVWMPQDG DFLGVDAVGD NAEFVFLDYA RYGVVLYVHL RSRVVKKVYE
201: QAPYHHGFFR MGLSHIHVSP FMMVWPPVFP AKKRDTIKSN DPAVL
101: SAEGSGIYLV NADGFQLSVW LHRMMSNSDG ASGWLLVDTF CVREAYSSAG HNWVWMPQDG DFLGVDAVGD NAEFVFLDYA RYGVVLYVHL RSRVVKKVYE
201: QAPYHHGFFR MGLSHIHVSP FMMVWPPVFP AKKRDTIKSN DPAVL
001: MDNQKGALFP DEVILQILAR LPVKSLFRFK SVCKSWYRLP SDKYFTSLFN QLSVKEQLLV AEVSDSSSLI CVDNLRGVSE LSLDFVRDRV RIRVSSNGLL
101: CCSSIPEKGV YYVCNPSTRE YRKLPKSRER PVTRFYPDGE ATLVGLACDL SKNKFNVVLA GYHRSFGQRP DGSFICLVFD SESNKWRKFV SVLEECSFTH
201: MSKNQVVFVN GMLHWLMSGL CYILALDVEH DVWRKISLPD EIRIGNGGGN RVYLLESDGF LSVIQLSDVW MKIWKMSEYE TETWSVVDSI SLRCIKGLVP
301: GIFPICQTGE YVFLATHKQV LVYQRRSKLW KEMFSVKGSS SLPLWFSAHA FRSTIVPCN
101: CCSSIPEKGV YYVCNPSTRE YRKLPKSRER PVTRFYPDGE ATLVGLACDL SKNKFNVVLA GYHRSFGQRP DGSFICLVFD SESNKWRKFV SVLEECSFTH
201: MSKNQVVFVN GMLHWLMSGL CYILALDVEH DVWRKISLPD EIRIGNGGGN RVYLLESDGF LSVIQLSDVW MKIWKMSEYE TETWSVVDSI SLRCIKGLVP
301: GIFPICQTGE YVFLATHKQV LVYQRRSKLW KEMFSVKGSS SLPLWFSAHA FRSTIVPCN
Arabidopsis Description
F-box protein At5g49610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGY4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.