Factsheet for TraesCS3B01G505900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G456800.1	Wheat	cytosol	91.4	82.3
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	82.31	81.91
TraesCS3A01G462700.1	Wheat	cytosol	81.08	81.48
TraesCS3B01G506300.1	Wheat	cytosol	69.29	69.63
TraesCS3B01G504400.1	Wheat	cytosol	65.36	65.04
TraesCS3B01G504300.1	Wheat	cytosol	65.11	63.86
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	59.21	57.38
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	33.17	55.1
TraesCS6B01G120300.1	Wheat	cytosol	14.74	40.27
EES04961	Sorghum	cytosol, peroxisome, plastid	37.84	39.59
TraesCS6B01G120000.1	Wheat	cytosol	14.99	34.86
TraesCS3B01G497000.1	Wheat	cytosol	31.45	32.41
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	33.42	32.15
TraesCS6B01G032800.1	Wheat	cytosol	31.2	31.75
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	31.2	31.51
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	28.5	31.18
TraesCS3B01G466200.1	Wheat	cytosol	31.7	31.01
TraesCS3B01G496700.1	Wheat	cytosol	30.96	30.96
TraesCS6B01G032600.1	Wheat	cytosol	29.73	30.71
TraesCS6B01G032500.1	Wheat	cytosol	29.48	30.46
TraesCS6B01G095500.1	Wheat	cytosol	29.98	30.27
TraesCS3B01G496600.2	Wheat	cytosol	30.96	30.0
TraesCS3B01G496900.1	Wheat	cytosol	29.98	29.98
TraesCS6B01G128400.1	Wheat	cytosol	33.66	29.65
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	32.68	29.49
TraesCS6B01G017300.1	Wheat	cytosol	30.96	29.44
TraesCS4B01G391600.1	Wheat	cytosol	32.92	28.76
TraesCS6B01G128500.1	Wheat	cytosol	28.5	27.88
TraesCS6B01G095400.1	Wheat	cytosol	21.13	27.3
Os04t0313500-00	Rice	cytosol	35.63	26.95
TraesCS7B01G400700.1	Wheat	cytosol	16.46	25.77
TraesCS1B01G083300.1	Wheat	cytosol	15.97	25.69
TraesCS3B01G128100.1	Wheat	cytosol	15.97	24.9
TraesCS6B01G019500.1	Wheat	cytosol	14.5	23.32
TraesCS5B01G497300.1	Wheat	cytosol	31.2	14.96
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	29.73	12.71

Protein Annotations

EnsemblPlants:TraesCS3B01G505900.1	EnsemblPlantsGene:TraesCS3B01G505900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr3B:+:749725776..749726999

Molecular Weight (calculated)

44928.4 Da

IEP (calculated)

7.163

GRAVY (calculated)

0.010

Length

407 amino acids

Sequence
(BLAST)

001: MDGDRRLPAA AALASAAAVL GDDNLLPEIL IRLGFPTCLI HAALISKRWL HHASDPAFLR RFRERNPPRL LGVCVGYPGR YRFVPLPQQP PELAAPIRRA
101: ISSCDAAFAR GCPRIKHCRN GRLIIEVFHA GRFDHPLVVP LLTGESAAVL PQIRPHRDRW VQGTQTGFTE MFLPEDGGRD GITLVNLWKD WPKVYAEVCI
201: LGSGRSGVPA RGSTEIELPD DIVFHEMLPP IHGKVFMVTN LGYTLGLDLA TRSLFTLELP VGVRGNYMLS CAEDSGLYLV SADGFQLSVW LHRMSGDDNG
301: AGWLLVDTFC VGVGQACTPR AEDSWVPHDV CLDVVAVGDD ADFVFLDHPA SGALFYVHLR SRVVEKVYQR GADECGYKRT AAGHVRVSPV MMIWPPIFPA
401: RNVKREE

Best Arabidopsis Sequence Match ( AT1G47765.1 )
(BLAST)

001: MEQQKQKKRK VVSKSKRTQS KSASSLPLDL TSEILLRLPE KSIARFRCVS KLWLSITTDP YFINLFETRS PRPSLLVCFI ENDKLFVSSI PQHLHSLQNS
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ

Arabidopsis Description

Putative F-box protein At1g47765 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.