Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G505900.1 | Wheat | cytosol | 82.3 | 91.4 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 73.67 | 81.42 |
| TraesCS3A01G462700.1 | Wheat | cytosol | 71.46 | 79.75 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 61.5 | 66.19 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 57.52 | 63.57 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 54.65 | 60.84 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 58.41 | 59.59 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 52.88 | 57.45 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 19.25 | 56.86 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 45.8 | 52.27 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 34.07 | 39.59 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 31.42 | 36.32 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 30.31 | 33.66 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 29.65 | 33.33 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 17.26 | 32.77 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 28.98 | 32.75 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 26.33 | 32.6 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 28.54 | 32.17 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 27.65 | 31.73 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 26.99 | 30.96 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 30.31 | 30.65 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 23.23 | 30.26 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 27.21 | 30.22 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 30.09 | 29.89 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 28.32 | 29.84 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 28.76 | 29.61 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 27.65 | 29.34 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 19.91 | 28.85 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 28.76 | 28.32 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 26.55 | 28.1 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 27.65 | 28.03 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 19.91 | 27.69 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 14.38 | 27.66 |
| Os04t0313500-00 | Rice | cytosol | 32.08 | 26.95 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 15.71 | 26.1 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 16.15 | 25.89 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 15.04 | 24.64 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 28.54 | 15.16 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G456800.1 | EnsemblPlantsGene:TraesCS3D01G456800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | PFAM:PF00646 | SEG:seg |
| SUPFAM:SSF81383 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:562504056..562505414
Molecular Weight (calculated)
50232.5 Da
IEP (calculated)
7.857
GRAVY (calculated)
-0.131
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MENGSGRTRK ETFDSAGVSI LPKYFLLRSH RNPSKPLPPE NPKTMDGDRR PTAAAALASA VAAVLGDDNL LREILLHLGF PTCLVHAALV SKRWLHHASD
101: PAFLRRFRER NPPCLLGACV GYPGRYRFVP LPQQPPELAA PIRRATSSCD AAFARRCPRI KHCRNGRLII EVFHAGRFDH PLVVPLLAGE SSTVLPQIRP
201: HRDRWVQGTQ TGFTEMFLPE EGGRDGITLV NLWKDWPKVY AEVCVLGSAR SGVPARGSTE IQLPDDTVFH EMLPPIHGKV FMVTNLGYTL CLDLATRSLF
301: TLELPVGVRG NYMLSCAEDS GLYLVSADGF QLSVWLHSML DDDNGAGWLL LDTFCVREAE ACTPRAEDSW APHDVCLDVV AVGDNADFVF LNHPASGALF
401: YVHLRSRVVE KVYQRGADEC GYKRAAAGYV RVSPVMMIWP PIFPARNMRR EE
101: PAFLRRFRER NPPCLLGACV GYPGRYRFVP LPQQPPELAA PIRRATSSCD AAFARRCPRI KHCRNGRLII EVFHAGRFDH PLVVPLLAGE SSTVLPQIRP
201: HRDRWVQGTQ TGFTEMFLPE EGGRDGITLV NLWKDWPKVY AEVCVLGSAR SGVPARGSTE IQLPDDTVFH EMLPPIHGKV FMVTNLGYTL CLDLATRSLF
301: TLELPVGVRG NYMLSCAEDS GLYLVSADGF QLSVWLHSML DDDNGAGWLL LDTFCVREAE ACTPRAEDSW APHDVCLDVV AVGDNADFVF LNHPASGALF
401: YVHLRSRVVE KVYQRGADEC GYKRAAAGYV RVSPVMMIWP PIFPARNMRR EE
001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV
Arabidopsis Description
F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.