Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 65.02 | 63.46 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 59.61 | 61.11 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 66.26 | 60.72 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 59.36 | 58.92 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 59.11 | 58.68 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 59.85 | 57.86 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 60.84 | 54.65 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 18.23 | 48.37 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 38.67 | 40.36 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 33.0 | 34.27 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 32.76 | 33.08 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 31.03 | 31.5 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 26.6 | 31.12 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 27.83 | 30.96 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 34.48 | 30.5 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 29.31 | 30.2 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 28.82 | 29.7 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 29.31 | 29.68 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 29.56 | 29.48 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 17.24 | 29.41 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 30.79 | 29.14 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 30.54 | 29.11 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 28.82 | 28.75 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 31.53 | 28.13 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 30.05 | 27.79 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 22.17 | 27.69 |
| Os04t0313500-00 | Rice | cytosol | 36.21 | 27.32 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 20.94 | 27.24 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 29.56 | 26.91 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 29.56 | 26.85 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 27.83 | 26.46 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 15.27 | 26.38 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 17.24 | 25.36 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 17.49 | 25.18 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 15.02 | 22.43 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 28.33 | 13.51 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G456200.1 | EnsemblPlantsGene:TraesCS3D01G456200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | PFAM:PF00646 | SEG:seg |
| SUPFAM:SSF81383 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:562348087..562350195
Molecular Weight (calculated)
45078.3 Da
IEP (calculated)
6.956
GRAVY (calculated)
0.088
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDRRLPPA ATLASAAAVL GNNDLLREIL LRLGFPTCLV HAALVSKRWL HHASNPAFLR HFRERNPPRV LGVFACYPGT PYKFLPLLQP PELAALSRRA
101: ASSFDGAFTA NTYQRVVHCR NSRLITVFLH EGTYRHSLLE PLLAGESEAV LPQTPLPRHL PPAHTQGVFS QTFLPEDGGR DGITLVSLWK VWREVRAEVC
201: VLGSGGWGVP TTAVTEVDLP YAETNFIEML PPVHGKVFMV TGFGYTLGLD LATSNFFTLE LPVGVRSNYM LSCAEGSGIY LFSADGFHLS VWLHGMMGNS
301: DGAGGWLLVD TFCVRCSAGH DWVWMAQDGD FLGVAAVEDN AEFVFLDYAR YGVVLYVHLR SRVVEKVHEQ ALLNHHFIRP DHIHISSFMM IWPPIFPALN
401: GRHDQK
101: ASSFDGAFTA NTYQRVVHCR NSRLITVFLH EGTYRHSLLE PLLAGESEAV LPQTPLPRHL PPAHTQGVFS QTFLPEDGGR DGITLVSLWK VWREVRAEVC
201: VLGSGGWGVP TTAVTEVDLP YAETNFIEML PPVHGKVFMV TGFGYTLGLD LATSNFFTLE LPVGVRSNYM LSCAEGSGIY LFSADGFHLS VWLHGMMGNS
301: DGAGGWLLVD TFCVRCSAGH DWVWMAQDGD FLGVAAVEDN AEFVFLDYAR YGVVLYVHLR SRVVEKVHEQ ALLNHHFIRP DHIHISSFMM IWPPIFPALN
401: GRHDQK
001: MKTSLRLEDG TKNSLQIPID LIIEIFLRLS VNSIARCRCV SKQWASTLSR PYFTELFLTR SLARPKLLFA YRKGSDYLFL SSPQLQNPDD DHKKSSPVVV
101: NYHMHHILTL GSGNMSWRTI QCCIPHRSFD GGICIDGLIY YYAGVNNNDI VIVCFDVRSE EFRFIIGALH HGSLINYNGK LSLYLPSTVY SRFNGVIRSI
201: KLWVLEDAKR QEWSEHTYIL PAMHDIMKTT DLRCVGMTQT KEFVFWSIKG MRFYVFYYNI ERNTIKKVEM QGMEAFKESN VYTFLDHVED VKLMQFF
101: NYHMHHILTL GSGNMSWRTI QCCIPHRSFD GGICIDGLIY YYAGVNNNDI VIVCFDVRSE EFRFIIGALH HGSLINYNGK LSLYLPSTVY SRFNGVIRSI
201: KLWVLEDAKR QEWSEHTYIL PAMHDIMKTT DLRCVGMTQT KEFVFWSIKG MRFYVFYYNI ERNTIKKVEM QGMEAFKESN VYTFLDHVED VKLMQFF
Arabidopsis Description
Putative F-box protein At2g19630 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN0]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.