Factsheet for TraesCS3D01G449500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G496600.2	Wheat	cytosol	93.66	95.0
TraesCS3A01G456400.1	Wheat	cytosol	47.89	86.81
TraesCS3D01G449600.1	Wheat	cytosol	63.38	67.33
TraesCS3D01G449700.1	Wheat	cytosol	61.03	63.88
TraesCS3D01G449800.1	Wheat	cytosol, mitochondrion, plasma membrane	41.08	62.06
TraesCS5D01G497500.1	Wheat	cytosol	30.28	54.89
TraesCS6D01G023200.1	Wheat	cytosol	47.65	50.75
TraesCS5D01G363300.1	Wheat	cytosol, nucleus, peroxisome	46.01	50.13
TraesCS6D01G055300.1	Wheat	cytosol	46.01	48.76
TraesCS2D01G057400.2	Wheat	cytosol	48.59	48.48
TraesCS3D01G110900.2	Wheat	cytosol	46.95	46.62
TraesCS6D01G027500.1	Wheat	cytosol	46.71	45.33
TraesCS6D01G027300.1	Wheat	cytosol	38.26	44.66
TraesCS6D01G027100.1	Wheat	cytosol	40.61	43.91
TraesCS6D01G069200.1	Wheat	cytosol	31.92	43.59
TraesCS6D01G027200.1	Wheat	cytosol	39.67	42.89
TraesCS5D01G363100.1	Wheat	cytosol	45.54	42.64
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	33.33	40.92
TraesCS1D01G065900.1	Wheat	cytosol	43.66	40.52
TraesCS6D01G044000.1	Wheat	cytosol	30.52	40.0
EES04945	Sorghum	cytosol	39.44	40.0
TraesCS6D01G080600.1	Wheat	cytosol	22.3	39.92
TraesCS6D01G080900.1	Wheat	cytosol	23.94	36.96
TraesCS2D01G064400.1	Wheat	cytosol	38.5	36.77
TraesCS7D01G484000.1	Wheat	cytosol, peroxisome, plastid	34.27	35.87
Os02t0288925-00	Rice	cytosol	34.98	35.14
TraesCS3D01G456400.1	Wheat	cytosol, plastid	12.44	34.64
TraesCS3D01G455200.1	Wheat	cytosol	31.22	32.52
TraesCS7D01G483700.1	Wheat	cytosol, mitochondrion	32.86	31.32
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	30.52	31.25
TraesCS3D01G457000.1	Wheat	plasma membrane	29.81	31.05
TraesCS3D01G457100.1	Wheat	cytosol	30.52	30.95
TraesCS3D01G456200.1	Wheat	cytosol	29.11	30.54
TraesCS7D01G484100.1	Wheat	cytosol	19.25	30.15
TraesCS3D01G455100.1	Wheat	cytosol	30.52	29.35
TraesCS3D01G456600.1	Wheat	cytosol	26.29	28.28
TraesCS3D01G456800.1	Wheat	cytosol	29.34	27.65
TraesCS6D01G082100.7	Wheat	cytosol	48.36	24.21

Protein Annotations

EnsemblPlants:TraesCS3D01G449500.1	EnsemblPlantsGene:TraesCS3D01G449500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr3D:+:557721103..557723989

Molecular Weight (calculated)

47715.2 Da

IEP (calculated)

6.192

GRAVY (calculated)

-0.193

Length

426 amino acids

Sequence
(BLAST)

001: METSTQNVRS GGTMEGEAQP PPACVSKVLD EDNLLREIIV RVGFPTSLVR AAGVCTRWLS HASDRALLRR FRELHPPRLL GFYLAKRERP GGARFFPVLP
101: LPPDLAAVVR RASFSLDAHE GARRSAGFSP DTHSDGRSDV VGCWNGSVLT SSQGQNYAHG RSEIMFQVHS PLCSGSEKGA AIIPALHLKV QDGICRLIRQ
201: LFFREEGDGL SYFYVTVECT RYHEDSKVHV YMLQNGDDAW RKHLTLASDL LLYPRKSPKG VLVDSKIYLP TDNEIVVLDL MSSSLSTIQL PQGVGFSPIG
301: TTMLSRADDA SGVYLIHIKD LQLSIWLHNG DNWLLVDKMC LCEISDNLLD DEPTDDILIN HVGDYNEFVF LEMGRCALYL DVKRRTLRKV YEMTTEEQQL
401: GDIYPLMMSW LPSFPALMDN PTRNAT

Best Arabidopsis Sequence Match ( AT3G42770.1 )
(BLAST)

001: MNCLPDELLV QILSFLPTKE ATSTSLLSKR WRTLFTLSPN LDFDNSLLLQ SKKRKWNMRN IQKSFVGFVD STLALQGGKG IKSFSLKFKE TLGDVNGEVD
101: VNRWICNALE HGVSELHLRI DYTKRCHLPS EIFTSTKLVK LSLVTQSCFP VVPNCISLPS LKVLFLDSIW FEVPQFLIFL TACPALEDLT IYQKPHSVGM
201: PYHISSKTIK RLSVTYTCGY FVDYGLKLFN TPSVVDLYYS DYVRHKYPHM NLDSLPKATL DIHFLDDNAA NVTELLSGIR NVKTLHLTSS TVKVILLCCK
301: GEIPMFENLI NLKFSGKTRQ WKFLLPLLLE ICPNLTTLVL SGLDQNWFVG FRTPPNNQVK MLSIMQYQGS ERELKLISYF VLKMECLQVV KVYVSSPMND
401: LKKMQLTEDL LKLPKASPKL NIQVLVPSDT YLPALKVLFL DSVWFDFHQF ANVFFPACPA LEDFAIHIKS FRRKARSENE LEHISHFSLK MEFLEVLKVY
501: VALTMDDTKK VELTKELLKL PISSSKLIIQ VM

Arabidopsis Description

Putative F-box/LRR-repeat protein At3g42770 [Source:UniProtKB/Swiss-Prot;Acc:Q9M190]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.