Factsheet for TraesCS3D01G455200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G504400.1	Wheat	cytosol	81.42	81.42
TraesCS3D01G457100.1	Wheat	cytosol	66.01	64.29
TraesCS3D01G457000.1	Wheat	plasma membrane	63.33	63.33
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	60.64	59.62
TraesCS3D01G456200.1	Wheat	cytosol	58.92	59.36
TraesCS3D01G456800.1	Wheat	cytosol	63.57	57.52
TraesCS3D01G455100.1	Wheat	cytosol	60.88	56.21
TraesCS3D01G456600.1	Wheat	cytosol	51.1	52.78
TraesCS3D01G456400.1	Wheat	cytosol, plastid	19.56	52.29
EES04961	Sorghum	cytosol, peroxisome, plastid	39.61	41.65
TraesCS5D01G363300.1	Wheat	cytosol, nucleus, peroxisome	34.72	36.32
TraesCS6D01G055300.1	Wheat	cytosol	33.99	34.58
TraesCS3D01G449600.1	Wheat	cytosol	33.5	34.16
TraesCS7D01G484000.1	Wheat	cytosol, peroxisome, plastid	33.5	33.66
TraesCS6D01G023200.1	Wheat	cytosol	32.27	33.0
TraesCS6D01G027300.1	Wheat	cytosol	29.34	32.88
TraesCS3D01G449700.1	Wheat	cytosol	32.52	32.68
TraesCS6D01G027100.1	Wheat	cytosol	31.3	32.49
TraesCS6D01G080600.1	Wheat	cytosol	18.58	31.93
TraesCS6D01G027200.1	Wheat	cytosol	30.56	31.73
TraesCS1D01G402800.1	Wheat	cytosol, nucleus, peroxisome	26.89	31.7
TraesCS1D01G065900.1	Wheat	cytosol	35.21	31.37
TraesCS3D01G449500.1	Wheat	cytosol	32.52	31.22
TraesCS3D01G110900.2	Wheat	cytosol	32.03	30.54
TraesCS5D01G363100.1	Wheat	cytosol	33.5	30.11
TraesCS6D01G027500.1	Wheat	cytosol	31.78	29.61
TraesCS6D01G069200.1	Wheat	cytosol	22.49	29.49
TraesCS2D01G064400.1	Wheat	cytosol	32.03	29.37
TraesCS7D01G483700.1	Wheat	cytosol, mitochondrion	31.54	28.86
TraesCS2D01G057400.2	Wheat	cytosol	29.83	28.57
Os04t0313500-00	Rice	cytosol	37.16	28.25
TraesCS6D01G044000.1	Wheat	cytosol	22.0	27.69
TraesCS3D01G449800.1	Wheat	cytosol, mitochondrion, plasma membrane	18.58	26.95
TraesCS5D01G497500.1	Wheat	cytosol	15.16	26.38
TraesCS6D01G080900.1	Wheat	cytosol	17.11	25.36
TraesCS7D01G484100.1	Wheat	cytosol	15.89	23.9
TraesCS6D01G082100.7	Wheat	cytosol	30.32	14.57

Protein Annotations

EnsemblPlants:TraesCS3D01G455200.1	EnsemblPlantsGene:TraesCS3D01G455200	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	PFAM:PF00646
SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3D:-:561461195..561462669

Molecular Weight (calculated)

45777.5 Da

IEP (calculated)

7.209

GRAVY (calculated)

0.069

Length

409 amino acids

Sequence
(BLAST)

001: MDGDRRPPAA AAAASAASVL GDDDLLREIL LRLGFPTCLV RAALVCKRWL LHASDPAFLR RFRERNPPRL LGFCLRCPDG YSFVPLPQPP ELAVPIRRAT
101: SSCAAAFAIK IHRIKHCRNG RLITNYFDGC THHHAIMAPL LHGESATALP PIPLHSRDWA RRAQVRFFEM FLPEDGGLHG ITLLHLWMVG RKIYAEVCVL
201: RSSGWGVPAT AEMELPAQRY DEGFLDDMLP PVLGKVFMVT ASGTGYALGL DLATASFFTL ELPVGVQSNY KLSCAEDSGL YLVSADGFQL SVWLHPMIGD
301: DDGGANWRLV DTFCVHETCT RLVDRYWVPL YNFIAVDFVG DNAEFVILYH PASCIFFYVH LRNRVVEKVY QRPTPTAITP VYGRFHISPV MMTWPPIFPT
401: LNKGHDQEE

Best Arabidopsis Sequence Match ( AT5G07610.1 )
(BLAST)

001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV

Arabidopsis Description

F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.