Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G095400.1 | Wheat | cytosol | 92.63 | 91.75 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 52.24 | 50.15 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 41.99 | 46.45 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 32.69 | 43.4 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 44.23 | 39.77 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 34.62 | 39.13 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 46.79 | 37.34 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 46.15 | 35.82 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 45.83 | 35.14 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 51.6 | 35.08 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 47.12 | 34.27 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 43.59 | 33.92 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 42.95 | 33.5 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 37.5 | 32.05 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 40.38 | 31.98 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 40.38 | 31.98 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 43.59 | 31.92 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 46.15 | 31.65 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 27.24 | 31.25 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 42.31 | 30.91 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 42.63 | 30.3 |
| EES04945 | Sorghum | cytosol | 39.74 | 29.52 |
| Os02t0288925-00 | Rice | cytosol | 36.54 | 26.89 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 38.14 | 26.68 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 33.01 | 25.31 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 17.63 | 23.11 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 29.49 | 22.49 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 29.49 | 22.12 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 31.09 | 21.7 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 27.24 | 20.94 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 27.24 | 20.78 |
| TraesCS3D01G455100.1 | Wheat | cytosol | 29.49 | 20.77 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 27.24 | 20.24 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 25.32 | 19.95 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 28.85 | 19.91 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 39.1 | 14.34 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 3.21 | 6.54 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G069200.1 | EnsemblPlantsGene:TraesCS6D01G069200 | InterPro:Gal_Oxase/kelch_b-propeller | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SUPFAM:SSF50965 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:34583067..34584056
Molecular Weight (calculated)
35885.4 Da
IEP (calculated)
7.539
GRAVY (calculated)
-0.176
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPQPPELNT VVRRMANHNF DDPKNLWIMD SRNGSIFTRR REGRELAYGV HRRELAYGLH RPLCPERGIN VVPALPRAQD YNRQYFDAIL SKEEGNGLSY
101: FYVLTELTNQ TENFTLRVYM LQGSVWCLHT SATAQLHLPL PKAKVVLVDN KIYMVVSPAD DIIVLDLTTS SLSRIQHPPG VKYDIFHTFL SRADDPSGVY
201: VIHVNGFKLC IWLHKGDNWL LVDTICLHEM CANLRMLDNT LEDAHSGYCY VCHAGDNAEF VVLQMCGCIF YLDVKNRTLR KLVAKDQYFT DVYPFMMVWP
301: PTFPKLKDGP AR
101: FYVLTELTNQ TENFTLRVYM LQGSVWCLHT SATAQLHLPL PKAKVVLVDN KIYMVVSPAD DIIVLDLTTS SLSRIQHPPG VKYDIFHTFL SRADDPSGVY
201: VIHVNGFKLC IWLHKGDNWL LVDTICLHEM CANLRMLDNT LEDAHSGYCY VCHAGDNAEF VVLQMCGCIF YLDVKNRTLR KLVAKDQYFT DVYPFMMVWP
301: PTFPKLKDGP AR
001: MESGTKKKKI DYYTEDLVVN ILARLPLKSI TAFTLVCKEW KSIVESQYLH ELFMSHHQDS HPSWSLMCRE THKEVIAHYR CDTWGLTQSL GSYISSFLTH
101: KFGIHKEKVT VEAYTDVGLI LVTDIYKPSG LATRIENGVV LGYKVVLMKD TTDTDDISLL IYSSETGLWS FNTVQSPYLL KRVAWFNPVS LNGNLYWLCY
201: NNYRDHLVVS HNLYATGTES DQCRVIEFPH LENDVYFRRA FTTSQGSLMY MKIINEEKDD GSLGLKLCVW RLKSGKWEIV SEISPACIKS GLDYFPLAIN
301: PFDANKMYLW SEMHKCLVST SLLKGKFRRH KKLEYSSDGR IMSFAGDWSP FEHLFNPCFS RFALPHWLHR IPSSPPTDKL RMRIRLRKRA T
101: KFGIHKEKVT VEAYTDVGLI LVTDIYKPSG LATRIENGVV LGYKVVLMKD TTDTDDISLL IYSSETGLWS FNTVQSPYLL KRVAWFNPVS LNGNLYWLCY
201: NNYRDHLVVS HNLYATGTES DQCRVIEFPH LENDVYFRRA FTTSQGSLMY MKIINEEKDD GSLGLKLCVW RLKSGKWEIV SEISPACIKS GLDYFPLAIN
301: PFDANKMYLW SEMHKCLVST SLLKGKFRRH KKLEYSSDGR IMSFAGDWSP FEHLFNPCFS RFALPHWLHR IPSSPPTDKL RMRIRLRKRA T
Arabidopsis Description
F-box family protein [Source:UniProtKB/TrEMBL;Acc:F4IZ09]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.