Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G069200.1 | Wheat | cytosol | 91.75 | 92.63 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 74.29 | 58.06 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 43.17 | 53.75 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 37.78 | 45.59 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 36.19 | 45.06 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 54.6 | 40.66 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 57.46 | 39.18 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 49.84 | 38.96 |
| TraesCS6A01G010800.1 | Wheat | cytosol | 52.38 | 37.93 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 43.81 | 34.94 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 43.81 | 33.91 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 46.03 | 33.88 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 44.44 | 33.65 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 41.9 | 33.0 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 47.94 | 32.4 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 40.32 | 32.23 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 46.03 | 32.15 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 42.86 | 32.14 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 40.95 | 31.7 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 38.73 | 30.96 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 35.24 | 29.84 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 39.37 | 29.81 |
| EES04945 | Sorghum | cytosol | 39.05 | 29.29 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 23.81 | 28.85 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 21.59 | 27.76 |
| Os02t0288925-00 | Rice | cytosol | 35.24 | 26.18 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.94 | 21.52 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 27.94 | 21.2 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 27.3 | 21.13 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 26.98 | 20.99 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 27.62 | 20.71 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 25.71 | 19.8 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 8.89 | 16.0 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 39.05 | 14.49 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 40.95 | 13.55 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 4.76 | 10.07 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G095400.1 | EnsemblPlantsGene:TraesCS6B01G095400 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:-:71350926..71352515
Molecular Weight (calculated)
36297.9 Da
IEP (calculated)
7.828
GRAVY (calculated)
-0.263
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPQPPEFNT VVRRMVNHNF DDPKNLRIMD SRNGSIFTRR REGRELAYGV RHIELAYGVH RPLCPERGIN IVPPLPRAQD HNRQYFDSIL SKEEGNGLSY
101: FYVLTELTNQ TENFTLRVYM LQGSVWCLHT SATAQLHLPL PKAKVVLVDN KIYMVVSPAD DIIVLDLTAS SLSRIQHPPG VKYDNFHTLS RADDPSGVYV
201: IHVNGFKLCI WLHKGDNWLL VDTICLHEMC ANPRMLDNML EDEHSRYCYV CHAGDNAEFV VLQTRGCVFY LDVKNRTLRK LVAKNQDHFT DVYPFMMVWP
301: PTFPKLKDGP ARIAM
101: FYVLTELTNQ TENFTLRVYM LQGSVWCLHT SATAQLHLPL PKAKVVLVDN KIYMVVSPAD DIIVLDLTAS SLSRIQHPPG VKYDNFHTLS RADDPSGVYV
201: IHVNGFKLCI WLHKGDNWLL VDTICLHEMC ANPRMLDNML EDEHSRYCYV CHAGDNAEFV VLQTRGCVFY LDVKNRTLRK LVAKNQDHFT DVYPFMMVWP
301: PTFPKLKDGP ARIAM
001: MESGTKKKKI DYYTEDLVVN ILARLPLKSI TAFTLVCKEW KSIVESQYLH ELFMSHHQDS HPSWSLMCRE THKEVIAHYR CDTWGLTQSL GSYISSFLTH
101: KFGIHKEKVT VEAYTDVGLI LVTDIYKPSG LATRIENGVV LGYKVVLMKD TTDTDDISLL IYSSETGLWS FNTVQSPYLL KRVAWFNPVS LNGNLYWLCY
201: NNYRDHLVVS HNLYATGTES DQCRVIEFPH LENDVYFRRA FTTSQGSLMY MKIINEEKDD GSLGLKLCVW RLKSGKWEIV SEISPACIKS GLDYFPLAIN
301: PFDANKMYLW SEMHKCLVST SLLKGKFRRH KKLEYSSDGR IMSFAGDWSP FEHLFNPCFS RFALPHWLHR IPSSPPTDKL RMRIRLRKRA T
101: KFGIHKEKVT VEAYTDVGLI LVTDIYKPSG LATRIENGVV LGYKVVLMKD TTDTDDISLL IYSSETGLWS FNTVQSPYLL KRVAWFNPVS LNGNLYWLCY
201: NNYRDHLVVS HNLYATGTES DQCRVIEFPH LENDVYFRRA FTTSQGSLMY MKIINEEKDD GSLGLKLCVW RLKSGKWEIV SEISPACIKS GLDYFPLAIN
301: PFDANKMYLW SEMHKCLVST SLLKGKFRRH KKLEYSSDGR IMSFAGDWSP FEHLFNPCFS RFALPHWLHR IPSSPPTDKL RMRIRLRKRA T
Arabidopsis Description
F-box family protein [Source:UniProtKB/TrEMBL;Acc:F4IZ09]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.