Factsheet for TraesCS3B01G504600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	93.33	94.23
TraesCS3A01G461800.1	Wheat	cytosol, peroxisome, plastid	78.57	89.67
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	36.67	62.86
TraesCS3B01G506300.1	Wheat	cytosol	60.48	62.72
TraesCS3B01G504300.1	Wheat	cytosol	61.43	62.17
TraesCS3B01G504400.1	Wheat	cytosol	58.81	60.39
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	58.1	59.66
TraesCS3B01G505900.1	Wheat	cytosol	57.38	59.21
EES04961	Sorghum	cytosol, peroxisome, plastid	38.57	41.65
TraesCS6B01G120300.1	Wheat	cytosol	13.33	37.58
TraesCS3B01G497000.1	Wheat	cytosol	32.14	34.18
TraesCS6B01G032800.1	Wheat	cytosol	32.14	33.75
TraesCS6B01G120000.1	Wheat	cytosol	14.05	33.71
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	32.14	33.5
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	33.33	33.1
TraesCS3B01G466200.1	Wheat	cytosol	32.62	32.93
TraesCS3B01G496700.1	Wheat	cytosol	31.67	32.68
TraesCS6B01G032600.1	Wheat	cytosol	30.24	32.23
TraesCS3B01G496900.1	Wheat	cytosol	31.19	32.19
TraesCS6B01G032500.1	Wheat	cytosol	29.76	31.73
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	28.1	31.72
TraesCS6B01G128400.1	Wheat	cytosol	34.05	30.95
TraesCS3B01G496600.2	Wheat	cytosol	30.95	30.95
TraesCS6B01G095500.1	Wheat	cytosol	29.52	30.77
TraesCS6B01G017300.1	Wheat	cytosol	30.95	30.37
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	31.9	29.71
TraesCS4B01G391600.1	Wheat	cytosol	32.38	29.18
TraesCS6B01G128500.1	Wheat	cytosol	28.81	29.09
TraesCS3B01G128100.1	Wheat	cytosol	17.86	28.74
TraesCS1B01G083300.1	Wheat	cytosol	17.14	28.46
Os04t0313500-00	Rice	cytosol	36.43	28.44
TraesCS7B01G400700.1	Wheat	cytosol	17.38	28.08
TraesCS6B01G095400.1	Wheat	cytosol	20.71	27.62
TraesCS6B01G019500.1	Wheat	cytosol	15.95	26.48
TraesCS5B01G497300.1	Wheat	cytosol	30.71	15.19
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	31.19	13.76

Protein Annotations

EnsemblPlants:TraesCS3B01G504600.1	EnsemblPlantsGene:TraesCS3B01G504600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr3B:-:749024555..749025817

Molecular Weight (calculated)

46289.9 Da

IEP (calculated)

8.232

GRAVY (calculated)

-0.025

Length

420 amino acids

Sequence
(BLAST)

001: MDGDGLPPPA AAAAPAPSVA SVLGDDDLFR EILLCLGFPN LLVRAALVSK RWLLHASDPV FLRRFRERNP PRLLGFYAGY PGRYQFVPLP QPPELAALSR
101: RPASPCDGTF ARGAERLIHC RNGRLLTAFR SRWRQLRGGR FKHYLLAPLL AGESPTVLPP APPPTHERAQ ARFTQMFLPG DGGRDGITLV HLLMVGRKVY
201: AEVYALGSSG WGVPGTAVME IEHPHGTTFL EELLPPVHGK VFTLTTSGYI LGLDLATSTF FTLELPVGVR RSYLLSCAED SGLYLVSADG FQLSVWLNGM
301: TGDGHGAAGW LLVDTFSIRE GCTRFADQNQ TSMPQDGDFL RVAAVGDNAE FVFLDYATYS VVLYVHLRSR VVAKVYEQAP YDHGNVHVSR IHISPFMMMW
401: PPVFPALNRG HDKEQLSQRV

Best Arabidopsis Sequence Match ( AT5G07610.1 )
(BLAST)

001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV

Arabidopsis Description

F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.