Factsheet for TraesCS3A01G461800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G455400.1	Wheat	cytosol, peroxisome, plastid	89.13	78.85
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	89.67	78.57
TraesCS3A01G461700.1	Wheat	cytosol	64.67	57.21
TraesCS3A01G463100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	61.41	55.26
TraesCS3A01G462700.1	Wheat	cytosol	51.36	46.67
EES04961	Sorghum	cytosol, peroxisome, plastid	41.85	39.59
TraesCS1A01G415600.1	Wheat	cytosol	35.6	33.5
TraesCS6A01G047800.1	Wheat	cytosol	35.05	32.17
TraesCS3A01G109100.1	Wheat	cytosol	36.14	31.52
TraesCS3A01G456500.1	Wheat	cytosol	33.42	31.38
TraesCS1A01G393700.1	Wheat	cytosol	35.6	30.97
TraesCS6A01G023800.1	Wheat	cytosol	32.34	30.36
TraesCS6A01G100400.1	Wheat	cytosol	35.6	30.11
TraesCS3A01G428600.1	Wheat	cytosol	27.99	30.03
TraesCS6A01G023900.1	Wheat	cytosol	31.52	29.44
TraesCS6A01G010800.1	Wheat	cytosol	33.97	28.74
TraesCS2A01G058400.1	Wheat	cytosol	27.99	27.39
TraesCS2A01G066000.1	Wheat	cytosol	31.52	26.54
TraesCS3A01G456400.1	Wheat	cytosol	16.03	25.11
TraesCS7A01G496900.1	Wheat	cytosol	18.48	23.37
TraesCS6A01G100500.1	Wheat	cytosol	31.52	14.16

Protein Annotations

EnsemblPlants:TraesCS3A01G461800.1	EnsemblPlantsGene:TraesCS3A01G461800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SEG:seg	SUPFAM:SSF81383	MapMan:35.2	:

Description

No Description!

Coordinates

chr3A:-:697453011..697457482

Molecular Weight (calculated)

40891.6 Da

IEP (calculated)

8.725

GRAVY (calculated)

0.028

Length

368 amino acids

Sequence
(BLAST)

001: MDGDGPPPPA ASVASVLGDD DLFREILLCL GFPNLLVRAA LVSKRWLLHA SDPVFLRRFR ERNPPRLLGF YAGYPGRYQF VPLPQPPELA ALSRRPASSC
101: DGAFARGAER LIHCRNGRLL TAFRSRWRQL RGGSFKHYLL APLLAGEAPT VLPPAPPPIH GRALARFTQL FLPEDGGRDG ITLVNLLMVG RKVYAEVYTL
201: GSGGWDFPGT EVIEIELPHA TTFLQEMLPP VHGKAFVVTT SGYTLGLDLA TSTFFTLELP VGVWRSYLLS SAKDSGLYLV SADGFQLSVW LNGMTVGDNA
301: EFVFLDYATY GVVLYVHLRS RVVDKVYEQA LYHHGNIHPG ISRIHISPFM MMWPPVFPAL NRRHDQEQ

Best Arabidopsis Sequence Match ( AT5G07610.1 )
(BLAST)

001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV

Arabidopsis Description

F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.