Factsheet for TraesCS3A01G109100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G128100.1	Wheat	cytosol	58.06	93.87
TraesCS3D01G110900.2	Wheat	cytosol	93.84	92.31
TraesCS3A01G428600.1	Wheat	cytosol	40.76	50.15
TraesCS3A01G456500.1	Wheat	cytosol	44.08	47.45
TraesCS1A01G393700.1	Wheat	cytosol	47.39	47.28
TraesCS2A01G058400.1	Wheat	cytosol	41.71	46.81
TraesCS6A01G023800.1	Wheat	cytosol	43.36	46.68
TraesCS6A01G047800.1	Wheat	cytosol	44.31	46.63
TraesCS6A01G023900.1	Wheat	cytosol	43.13	46.19
TraesCS6A01G100400.1	Wheat	cytosol	45.97	44.6
TraesCS3A01G456400.1	Wheat	cytosol	24.41	43.83
TraesCS6A01G010800.1	Wheat	cytosol	45.02	43.68
EES04945	Sorghum	cytosol	41.71	41.9
TraesCS2A01G066000.1	Wheat	cytosol	38.63	37.3
TraesCS3A01G461800.1	Wheat	cytosol, peroxisome, plastid	31.52	36.14
Os02t0288925-00	Rice	cytosol	34.36	34.2
TraesCS3A01G463100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.57	31.54
TraesCS3A01G461700.1	Wheat	cytosol	30.81	31.25
TraesCS7A01G496900.1	Wheat	cytosol	19.91	28.87
TraesCS1A01G415600.1	Wheat	cytosol	24.88	26.85
TraesCS3A01G462700.1	Wheat	cytosol	24.41	25.43
TraesCS6A01G100500.1	Wheat	cytosol	46.45	23.93

Protein Annotations

EnsemblPlants:TraesCS3A01G109100.1	EnsemblPlantsGene:TraesCS3A01G109100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SUPFAM:SSF81383	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3A:-:75028781..75032536

Molecular Weight (calculated)

48286.7 Da

IEP (calculated)

6.286

GRAVY (calculated)

-0.066

Length

422 amino acids

Sequence
(BLAST)

001: MLGPPDGSIL TEVAMEGEKQ PQPAVADSSA TVSKVLNDDN LLVEILLRVS FPNTLVRAAL VCRRWLCHVS DKAFLGRFRK LHPPRLLGFY IDTGMGPRFT
101: PMLPQPPELA AVIDRACFCP DTWQCTRADV IDCRNGRVLT MLQDGPRFKL GVHTALCTER DMTTFPPLPR YNRPEGRFCI WPCLLSKEQG DDLSYFYVLI
201: ESSEETTKVT VRVYMLQHGV WCTHHTLATD QPSLPLWDPK LVLVDSKIYI TVAPRNIMVL DLSVSSCSTI FLPRGVEYGD RDAMLSRADD ASSVYLIQVK
301: EFQLHIWLHE GNNWLLVHAI FMSEMVADLR MQDYTVEDGH IDVLRILQVG DNAEFVFFQM GRCILYLDIK GKTLRKVYAM KDKDWYSAYY IFPFKMVWPP
401: IFPALKLNLQ ESPSEEQYHP AQ

Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)

001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI

Arabidopsis Description

Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.