Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 93.85 | 93.85 |
TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 75.89 | 92.51 |
TraesCS6A01G100400.1 | Wheat | cytosol | 66.43 | 64.6 |
TraesCS6A01G010800.1 | Wheat | cytosol | 53.66 | 52.18 |
TraesCS6A01G047800.1 | Wheat | cytosol | 47.04 | 49.63 |
TraesCS3A01G109100.1 | Wheat | cytosol | 47.28 | 47.39 |
TraesCS6A01G023900.1 | Wheat | cytosol | 43.26 | 46.45 |
TraesCS6A01G023800.1 | Wheat | cytosol | 42.79 | 46.17 |
TraesCS3A01G456400.1 | Wheat | cytosol | 25.3 | 45.53 |
TraesCS3A01G456500.1 | Wheat | cytosol | 42.08 | 45.41 |
TraesCS2A01G058400.1 | Wheat | cytosol | 39.95 | 44.95 |
TraesCS3A01G428600.1 | Wheat | cytosol | 36.41 | 44.9 |
EES04945 | Sorghum | cytosol | 41.84 | 42.14 |
TraesCS2A01G066000.1 | Wheat | cytosol | 40.66 | 39.36 |
Os02t0288925-00 | Rice | cytosol | 38.06 | 37.97 |
TraesCS3A01G461800.1 | Wheat | cytosol, peroxisome, plastid | 30.97 | 35.6 |
TraesCS3A01G463100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 32.39 | 33.5 |
TraesCS3A01G461700.1 | Wheat | cytosol | 31.68 | 32.21 |
TraesCS7A01G496900.1 | Wheat | cytosol | 21.28 | 30.93 |
TraesCS1A01G415600.1 | Wheat | cytosol | 26.71 | 28.9 |
TraesCS3A01G462700.1 | Wheat | cytosol | 24.82 | 25.93 |
TraesCS6A01G100500.1 | Wheat | cytosol | 42.79 | 22.1 |
Protein Annotations
EnsemblPlants:TraesCS1A01G393700.1 | EnsemblPlantsGene:TraesCS1A01G393700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr1A:-:560179285..560181543
Molecular Weight (calculated)
48163.1 Da
IEP (calculated)
7.485
GRAVY (calculated)
0.038
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDASEEISP RLRPEKKPCA DGESQQHSPA SMVPVSKVLD DDNLLIEILL RVSFPTTLVC AALVCKRWLC HASDPKFLSL FRKRHPPRLL GFYIYIGSSW
101: LWLGAPLLFV PMQPQPPELA PFICRVASHS FGADNDRLCI MDCRNGSLLI RCRRGTILTH GVHRPLCPQR DIDVIPPLPR AQYHGQKIFN TILSKEEGGV
201: LSYLYMLAEF FSKPKIFRVR VYMLQGGVWC MHASATTQLP RLLTSLEVVL VDEKIYMADT FSDEIIVLDM TTSGFSTIPL PQGVNFHCVR TIMSRAGDAS
301: GVYLTHIHVK ELQLCIWLHK GDNWLLVHTI CLHQMWDNLR MLDQTLEDEH ISFTCISNVG DNAEFVFLEM CGCIFYLDVT SKTLRKVHGV TVKDRPFNDV
401: YPFMMIWPPK FPAPKDDPAR NAM
101: LWLGAPLLFV PMQPQPPELA PFICRVASHS FGADNDRLCI MDCRNGSLLI RCRRGTILTH GVHRPLCPQR DIDVIPPLPR AQYHGQKIFN TILSKEEGGV
201: LSYLYMLAEF FSKPKIFRVR VYMLQGGVWC MHASATTQLP RLLTSLEVVL VDEKIYMADT FSDEIIVLDM TTSGFSTIPL PQGVNFHCVR TIMSRAGDAS
301: GVYLTHIHVK ELQLCIWLHK GDNWLLVHTI CLHQMWDNLR MLDQTLEDEH ISFTCISNVG DNAEFVFLEM CGCIFYLDVT SKTLRKVHGV TVKDRPFNDV
401: YPFMMIWPPK FPAPKDDPAR NAM
001: MNRRKNDFLV RPKRIRCYTQ LSTLPIDLII EILSRLPMNS IAICRLVSKQ WASILQSSDF TESFLIKSPP RPRLLFTIRY GSKWHLFSAP QPRNFDENFP
101: VVATDYHKGF SGNWCMQSFQ LVNGFIYLNN RLSLKGKIDR VSVIWNPSTG QQIPLPDLGV KNSHSKSFFG YDPIEKQFKV LCITSSKEHQ VLTLGTGRKL
201: SWRKIEYSYP HYPRKKSNGI CINGVLYYRN TNAMIVRFDV RSEEFRFVEI KMYVEILSLI NYKGKLGVLF PNTDLAQLWV LDDTNKVEWS KHNFVFPDTT
301: FEAIRATDTG EMFCASSCWR DSLYVSYYDL EKESVKKVKI KGIEDKLSIG KHHANEFFIF PNHVENVMVL
101: VVATDYHKGF SGNWCMQSFQ LVNGFIYLNN RLSLKGKIDR VSVIWNPSTG QQIPLPDLGV KNSHSKSFFG YDPIEKQFKV LCITSSKEHQ VLTLGTGRKL
201: SWRKIEYSYP HYPRKKSNGI CINGVLYYRN TNAMIVRFDV RSEEFRFVEI KMYVEILSLI NYKGKLGVLF PNTDLAQLWV LDDTNKVEWS KHNFVFPDTT
301: FEAIRATDTG EMFCASSCWR DSLYVSYYDL EKESVKKVKI KGIEDKLSIG KHHANEFFIF PNHVENVMVL
Arabidopsis Description
Putative F-box protein At1g46984 [Source:UniProtKB/Swiss-Prot;Acc:Q9C627]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.