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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G423000.1 Wheat cytosol, nucleus, peroxisome 93.85 93.85
TraesCS1D01G402800.1 Wheat cytosol, nucleus, peroxisome 75.89 92.51
TraesCS6A01G100400.1 Wheat cytosol 66.43 64.6
TraesCS6A01G010800.1 Wheat cytosol 53.66 52.18
TraesCS6A01G047800.1 Wheat cytosol 47.04 49.63
TraesCS3A01G109100.1 Wheat cytosol 47.28 47.39
TraesCS6A01G023900.1 Wheat cytosol 43.26 46.45
TraesCS6A01G023800.1 Wheat cytosol 42.79 46.17
TraesCS3A01G456400.1 Wheat cytosol 25.3 45.53
TraesCS3A01G456500.1 Wheat cytosol 42.08 45.41
TraesCS2A01G058400.1 Wheat cytosol 39.95 44.95
TraesCS3A01G428600.1 Wheat cytosol 36.41 44.9
EES04945 Sorghum cytosol 41.84 42.14
TraesCS2A01G066000.1 Wheat cytosol 40.66 39.36
Os02t0288925-00 Rice cytosol 38.06 37.97
TraesCS3A01G461800.1 Wheat cytosol, peroxisome, plastid 30.97 35.6
TraesCS3A01G463100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 32.39 33.5
TraesCS3A01G461700.1 Wheat cytosol 31.68 32.21
TraesCS7A01G496900.1 Wheat cytosol 21.28 30.93
TraesCS1A01G415600.1 Wheat cytosol 26.71 28.9
TraesCS3A01G462700.1 Wheat cytosol 24.82 25.93
TraesCS6A01G100500.1 Wheat cytosol 42.79 22.1
Protein Annotations
EnsemblPlants:TraesCS1A01G393700.1EnsemblPlantsGene:TraesCS1A01G393700GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:F-box-like_dom_sf
PANTHER:PTHR33207PANTHER:PTHR33207:SF22SEG:segSUPFAM:SSF81383TMHMM:TMhelixMapMan:35.2
Description
No Description!
Coordinates
chr1A:-:560179285..560181543
Molecular Weight (calculated)
48163.1 Da
IEP (calculated)
7.485
GRAVY (calculated)
0.038
Length
423 amino acids
Sequence
(BLAST)
001: MMDASEEISP RLRPEKKPCA DGESQQHSPA SMVPVSKVLD DDNLLIEILL RVSFPTTLVC AALVCKRWLC HASDPKFLSL FRKRHPPRLL GFYIYIGSSW
101: LWLGAPLLFV PMQPQPPELA PFICRVASHS FGADNDRLCI MDCRNGSLLI RCRRGTILTH GVHRPLCPQR DIDVIPPLPR AQYHGQKIFN TILSKEEGGV
201: LSYLYMLAEF FSKPKIFRVR VYMLQGGVWC MHASATTQLP RLLTSLEVVL VDEKIYMADT FSDEIIVLDM TTSGFSTIPL PQGVNFHCVR TIMSRAGDAS
301: GVYLTHIHVK ELQLCIWLHK GDNWLLVHTI CLHQMWDNLR MLDQTLEDEH ISFTCISNVG DNAEFVFLEM CGCIFYLDVT SKTLRKVHGV TVKDRPFNDV
401: YPFMMIWPPK FPAPKDDPAR NAM
Best Arabidopsis Sequence Match ( AT1G46984.1 )
(BLAST)
001: MNRRKNDFLV RPKRIRCYTQ LSTLPIDLII EILSRLPMNS IAICRLVSKQ WASILQSSDF TESFLIKSPP RPRLLFTIRY GSKWHLFSAP QPRNFDENFP
101: VVATDYHKGF SGNWCMQSFQ LVNGFIYLNN RLSLKGKIDR VSVIWNPSTG QQIPLPDLGV KNSHSKSFFG YDPIEKQFKV LCITSSKEHQ VLTLGTGRKL
201: SWRKIEYSYP HYPRKKSNGI CINGVLYYRN TNAMIVRFDV RSEEFRFVEI KMYVEILSLI NYKGKLGVLF PNTDLAQLWV LDDTNKVEWS KHNFVFPDTT
301: FEAIRATDTG EMFCASSCWR DSLYVSYYDL EKESVKKVKI KGIEDKLSIG KHHANEFFIF PNHVENVMVL
Arabidopsis Description
Putative F-box protein At1g46984 [Source:UniProtKB/Swiss-Prot;Acc:Q9C627]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.