Factsheet for TraesCS3A01G456500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G449600.1	Wheat	cytosol	92.6	90.52
TraesCS3B01G496700.1	Wheat	cytosol	88.01	84.77
TraesCS3A01G456400.1	Wheat	cytosol	39.54	65.96
TraesCS3A01G428600.1	Wheat	cytosol	55.36	63.27
TraesCS6A01G047800.1	Wheat	cytosol	47.19	46.13
TraesCS2A01G058400.1	Wheat	cytosol	43.11	44.95
TraesCS3A01G109100.1	Wheat	cytosol	47.45	44.08
TraesCS6A01G023800.1	Wheat	cytosol	42.86	42.86
TraesCS6A01G023900.1	Wheat	cytosol	42.35	42.13
TraesCS1A01G393700.1	Wheat	cytosol	45.41	42.08
TraesCS6A01G100400.1	Wheat	cytosol	44.9	40.46
TraesCS6A01G010800.1	Wheat	cytosol	44.9	40.46
EES04945	Sorghum	cytosol	42.35	39.52
TraesCS2A01G066000.1	Wheat	cytosol	42.35	37.99
Os02t0288925-00	Rice	cytosol	38.52	35.61
TraesCS3A01G461800.1	Wheat	cytosol, peroxisome, plastid	31.38	33.42
TraesCS3A01G463100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.91	31.54
TraesCS3A01G461700.1	Wheat	cytosol	32.91	31.01
TraesCS7A01G496900.1	Wheat	cytosol	22.19	29.9
TraesCS1A01G415600.1	Wheat	cytosol	29.34	29.41
TraesCS3A01G462700.1	Wheat	cytosol	24.74	23.95
TraesCS6A01G100500.1	Wheat	cytosol	46.43	22.22

Protein Annotations

EnsemblPlants:TraesCS3A01G456500.1	EnsemblPlantsGene:TraesCS3A01G456500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SUPFAM:SSF81383	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3A:+:693571909..693582130

Molecular Weight (calculated)

44436.7 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.031

Length

392 amino acids

Sequence
(BLAST)

001: MQDEARPPPA CVSKVLDDDN LLTEIIVRVG FPTSLVHAAC VCRRWLSHAS DRAFLRRFRE LHPPRLLGFY LAQSYPYNAA RFFPMLPQPP ELAAVIRRTN
101: FSKKEGGTMV GCSNGSVLTR RINFSVLSLT NSVLAYELVF AVHSPLCYDN DHGMAILPGL QFTMPCLHNW AQLFSKEEGD GSSYFYVTVE DTMHYRMNVY
201: MLQTGDDAWH KHLTLGSDRL LHPQSRPKGV LVDNKIYFAT DNAIVVLDLT SSILSTIQLP HGVGFDLGTT MLSRVDDGSG VYLIHIKELQ LHIWLHNGDN
301: WLLVDTICLS ETCAGLLEDE PTADIQINHV GDYNGFVFLE MGRSALYLDV RRRRLCKVYE MTTEEKCLGN IYPLMMTWPP IFPTLRPARF AF

Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)

001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI

Arabidopsis Description

Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.