Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G466200.1 | Wheat | cytosol | 88.63 | 73.08 |
| TraesCS3A01G456500.1 | Wheat | cytosol | 63.27 | 55.36 |
| TraesCS3A01G456400.1 | Wheat | cytosol | 31.49 | 45.96 |
| TraesCS2A01G058400.1 | Wheat | cytosol | 48.1 | 43.88 |
| TraesCS3A01G109100.1 | Wheat | cytosol | 50.15 | 40.76 |
| TraesCS6A01G047800.1 | Wheat | cytosol | 47.23 | 40.4 |
| TraesCS1A01G393700.1 | Wheat | cytosol | 44.9 | 36.41 |
| TraesCS6A01G010800.1 | Wheat | cytosol | 44.9 | 35.4 |
| TraesCS6A01G023800.1 | Wheat | cytosol | 39.94 | 34.95 |
| TraesCS6A01G100400.1 | Wheat | cytosol | 44.02 | 34.71 |
| TraesCS6A01G023900.1 | Wheat | cytosol | 39.36 | 34.26 |
| EES04945 | Sorghum | cytosol | 41.11 | 33.57 |
| TraesCS2A01G066000.1 | Wheat | cytosol | 40.82 | 32.04 |
| Os02t0288925-00 | Rice | cytosol | 37.61 | 30.42 |
| TraesCS3A01G461800.1 | Wheat | cytosol, peroxisome, plastid | 30.03 | 27.99 |
| TraesCS3A01G461700.1 | Wheat | cytosol | 33.53 | 27.64 |
| TraesCS3A01G463100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 32.94 | 27.63 |
| TraesCS1A01G415600.1 | Wheat | cytosol | 25.95 | 22.76 |
| TraesCS7A01G496900.1 | Wheat | cytosol | 19.24 | 22.68 |
| TraesCS6A01G100500.1 | Wheat | cytosol | 49.27 | 20.63 |
| TraesCS3A01G462700.1 | Wheat | cytosol | 23.32 | 19.75 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G428600.1 | EnsemblPlantsGene:TraesCS3A01G428600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SUPFAM:SSF81383 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3A:+:671759951..671760982
Molecular Weight (calculated)
38393.3 Da
IEP (calculated)
5.368
GRAVY (calculated)
-0.003
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGETRPPPE LDGMEGEAQP PAAACVSKVL DDENLLTEII VRVGCPTSLV RAAGVCRLWL SHASDRAFLR RFRELHPPRL LGFYLAQREY PDAAARFFPM
101: LPQPPGLDAV VRRASFSLDT YEGADMMECW NGSVLTCLHV QNFNHRRSEI IFAVHSPLCS ERGIPTIPAL HHKFGEGKLC TFIQLFSKEE GDGVSYFYIR
201: VECDRLQTYS TVHVYVLQNG DDVWRTHLTL ASGDILLYPR SSPKGVLVHN KIYVPCDPNE IVVLDLTTSI LLTIQLPQGV GFGLAGNTML SRADDSSGVY
301: LIHAKEFQLH IWLLKGDSWL LVDTICLREM CANLLEDEPI ADI
101: LPQPPGLDAV VRRASFSLDT YEGADMMECW NGSVLTCLHV QNFNHRRSEI IFAVHSPLCS ERGIPTIPAL HHKFGEGKLC TFIQLFSKEE GDGVSYFYIR
201: VECDRLQTYS TVHVYVLQNG DDVWRTHLTL ASGDILLYPR SSPKGVLVHN KIYVPCDPNE IVVLDLTTSI LLTIQLPQGV GFGLAGNTML SRADDSSGVY
301: LIHAKEFQLH IWLLKGDSWL LVDTICLREM CANLLEDEPI ADI
001: MGSSLCVAVR KKEKQKQKKT VVFLPEIPEE MLIDILIRLP AKSLMRFKCV SKLWLSLITS RYFTNRFFKP SSPSCLFAYL VDRENQSKYL LLQSSSSSRH
101: DHSDTSVSVI DQHSTIPIMG GYLVNAARGL LCYRTGRRVK VCNPSTRQIV ELPIMRSKTN VWNWFGHDPF HDEYKVLSLF WEVTKEQTVV RSEHQVLVLG
201: VGASWRNTKS HHTPHRPFHP YSRGMTIDGV LYYSARTDAN RCVLMSFDLS SEEFNLIELP FENWSRTIHM NYQGKVATCQ YMRLASDGFV DVCVLEDADK
301: SQWSNKKTFV LPISQMNFVH GDRLVVGASR DSGKVLMRKA NLLRNQHARF FLYDMERNEI ARRIEIRPSL LGSFNKTNQF LKVCYTFQTK
101: DHSDTSVSVI DQHSTIPIMG GYLVNAARGL LCYRTGRRVK VCNPSTRQIV ELPIMRSKTN VWNWFGHDPF HDEYKVLSLF WEVTKEQTVV RSEHQVLVLG
201: VGASWRNTKS HHTPHRPFHP YSRGMTIDGV LYYSARTDAN RCVLMSFDLS SEEFNLIELP FENWSRTIHM NYQGKVATCQ YMRLASDGFV DVCVLEDADK
301: SQWSNKKTFV LPISQMNFVH GDRLVVGASR DSGKVLMRKA NLLRNQHARF FLYDMERNEI ARRIEIRPSL LGSFNKTNQF LKVCYTFQTK
Arabidopsis Description
Putative F-box protein At3g52320 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.