Factsheet for TraesCS3B01G504400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G455200.1	Wheat	cytosol	81.42	81.42
TraesCS3B01G506300.1	Wheat	cytosol	66.01	66.67
TraesCS3B01G505900.1	Wheat	cytosol	65.04	65.36
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.08	63.08
TraesCS3B01G504300.1	Wheat	cytosol	61.61	60.72
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	60.39	58.81
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	32.52	54.29
EES04961	Sorghum	cytosol, peroxisome, plastid	40.34	42.42
TraesCS6B01G120300.1	Wheat	cytosol	14.18	38.93
TraesCS6B01G120000.1	Wheat	cytosol	14.67	34.29
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	33.74	34.24
TraesCS3B01G496700.1	Wheat	cytosol	33.25	33.42
TraesCS3B01G497000.1	Wheat	cytosol	31.78	32.91
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	33.5	32.39
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	29.34	32.26
TraesCS6B01G032800.1	Wheat	cytosol	31.54	32.25
TraesCS3B01G496600.2	Wheat	cytosol	32.76	31.9
TraesCS3B01G466200.1	Wheat	cytosol	31.78	31.25
TraesCS6B01G032600.1	Wheat	cytosol	30.07	31.22
TraesCS3B01G496900.1	Wheat	cytosol	30.81	30.96
TraesCS6B01G095500.1	Wheat	cytosol	30.32	30.77
TraesCS6B01G032500.1	Wheat	cytosol	29.58	30.71
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	33.5	30.38
TraesCS6B01G128400.1	Wheat	cytosol	33.74	29.87
TraesCS6B01G017300.1	Wheat	cytosol	31.05	29.67
TraesCS4B01G391600.1	Wheat	cytosol	33.25	29.18
Os04t0313500-00	Rice	cytosol	38.39	29.18
TraesCS6B01G019500.1	Wheat	cytosol	17.11	27.67
TraesCS6B01G128500.1	Wheat	cytosol	27.87	27.4
TraesCS1B01G083300.1	Wheat	cytosol	16.38	26.48
TraesCS6B01G095400.1	Wheat	cytosol	19.8	25.71
TraesCS7B01G400700.1	Wheat	cytosol	15.65	24.62
TraesCS3B01G128100.1	Wheat	cytosol	15.4	24.14
TraesCS5B01G497300.1	Wheat	cytosol	30.56	14.72
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	30.07	12.92

Protein Annotations

EnsemblPlants:TraesCS3B01G504400.1	EnsemblPlantsGene:TraesCS3B01G504400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	PFAM:PF00646	SEG:seg
SUPFAM:SSF81383	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:748785953..748787182

Molecular Weight (calculated)

45171.5 Da

IEP (calculated)

6.187

GRAVY (calculated)

0.137

Length

409 amino acids

Sequence
(BLAST)

001: MDGDRRSPAA AAAASAASVL DDDDLLREIL LRLGFPTCLV HAALVSKRWL LHASDPVFLR RFRERNPPRL LGFCIRGLDG YSFVPLPQPP ELAVPIHRVT
101: SSCAAAFSNI IHLIKHCRNG RLITESFHHK GTDRHALLAP LLAGESAAFP PPNPPPSRDW DGRAQVRYIE VFLPEDGGLD GITLVHLWNV GRKIYAEVCV
201: LGSDGWGVPA SAEMELPAHM ELAAQRYDER FLADMLPPVL GKVFMVTTSG GFTLGLDLAT ASFFTLELPV GVQSNYKLSC AEDSGLYLVS ADGFQLSVWL
301: HPMIGDDDGA GNWRLVDTFC VHETCTRLVD HYWVPLYNFI AVDFVGDNAD FAILDHPASD ILFYVHLRSR VVEKVYQRPT RFLTVLAAGG LHISPVMMTW
401: PPIFPALNI

Best Arabidopsis Sequence Match ( AT5G07610.1 )
(BLAST)

001: MSSCSRTRTK APRSARSRRN GGFSSSSATI VADIDDVLIQ ILSFLPIKTL LRFKRVSKRW LSLITNPVFS NRVIKSNHPL PISGFFLHSP REIKYSFVSL
101: DDDATNQRIS SSLPLWFTDH QTDMIIMQST NGLLLCKCSC ASSNHFNTNY YVYNPTTKQY TLLHQIAGHI ALSLAFDPSR SPHYKVFCLR GRSNNSFSSA
201: SDSELYHIEV YSSNEGLWRR VVPVPTSPST FIEFSYSVFW NGAVNWYGFS SRDCLSFDIN TQEIKILPLP DHEHEDEPLP DPRILMFLDE SQGNLYYIEV
301: NNQSSSNLRV YEMESNSSSW SVKYNVDLEP LAAAFPEMIR TEYYTDRRIY AFSVIGFVKE ETDAASYILL HIPNQAVKYN FIDKTFKKLC DFKSLVNDAP
401: EDHFYRFQRT FQFIKSLANV

Arabidopsis Description

F-box protein At5g07610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLS0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.