Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G120300.1 | Wheat | cytosol | 76.57 | 89.93 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 90.29 | 66.39 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 45.14 | 19.6 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 45.71 | 18.91 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 39.43 | 18.55 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 42.29 | 18.36 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 44.57 | 18.22 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 45.14 | 17.1 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 44.0 | 17.07 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 37.71 | 16.5 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 42.86 | 16.09 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 37.14 | 15.97 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 36.0 | 15.95 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 35.43 | 15.74 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 36.57 | 15.72 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 34.86 | 15.48 |
| EES04945 | Sorghum | cytosol | 36.57 | 15.24 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 36.0 | 15.14 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 34.86 | 14.99 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 35.43 | 14.76 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 34.29 | 14.67 |
| Os02t0288925-00 | Rice | cytosol | 35.43 | 14.62 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 33.71 | 14.57 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 33.71 | 14.43 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 34.29 | 14.42 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 33.71 | 14.22 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 33.71 | 14.05 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 16.0 | 8.89 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 40.0 | 8.24 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 40.57 | 7.46 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 4.0 | 2.77 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 3.43 | 2.3 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 2.86 | 1.98 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 1.71 | 1.15 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 1.14 | 0.82 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G120000.1 | EnsemblPlantsGene:TraesCS6B01G120000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr6B:+:114880189..114880826
Molecular Weight (calculated)
19608.1 Da
IEP (calculated)
7.609
GRAVY (calculated)
0.097
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPVEIPHWF NPVPNSMCVD GKRLRQSAMP VDPVSKVLDD DNLLIDILLL IGYPTTLICA SLVCKRWFYH ASDPAFLCRF RKLHPPCLLG VYFKTRANRS
101: RFVPMLPQPP ENDAVISCAS SSLDAHKLIL DDCNDIIFTK TCNNCKEEPG SIHIVLNPLC PARGMVIVPP FPCYG
101: RFVPMLPQPP ENDAVISCAS SSLDAHKLIL DDCNDIIFTK TCNNCKEEPG SIHIVLNPLC PARGMVIVPP FPCYG
0001: MPGNEFGERT HNFFGQEGLS QDQHQSQVVD GSWSSFSNGL VGNQRQIDPS LTADLKSYRT QQPVDPERGQ SSNSQHGLNF TQQPMRSEYS RSVLQEPQQP
0101: TNGYMHGNLG LQTMPNEANV LGMDVESSRD KLSERGFTPD LHKIPTRFEM GESPVNYDFF GGQQQSNTQL PGMLQPLPRQ QVSFNDMQLL KQQVMVKQMH
0201: EYQMQQQLQK QRLEARQLNS LNRNAVNGSC VSDNQSHMIN GIPLQNASSN WLQPDLMTGN TNWMHRGISP AVQGSSSGLM ITPDHGQANL MAQQFEPSLY
0301: GMPVSGTNAP HNAFSSSQMN RLAAQHGSAN RTSSVTNQPT SFLNQGDVQD SHMLPRSTYP EKLLFSQTSV PSSNSMPNFE SLQEDDSRER NISVQAKFGQ
0401: MEGSGPSEQS FIKAPENINA LQKSTALDPT EEKILFGSDD NLWEAFGNST DMSLTGNLMS SSSDLFDGCP SLQSGSWSAL MQSAVAETSS DDAGVHEWAN
0501: NSTGPHANFH RGNMAQDLGA KTSNTLSGRV HSDSTRTAVQ HLQDRGNSVA DNGLLENSMA QRNLMAENIF HSSSSGVDGQ NNSCSIRKNE GVEDRLGIWK
0601: AASNPNLVAL KEQNPSMQRT SYGFGIAGAG NDSRHLDNNS LEKAIPHLNS RDGSQILESY SSNNAGSNEM VNTRDLSTLP GGKETQSGHV GVRPSIPRKF
0701: QYHPMGNIDV TDEPCRGKVS RFGQSQSLGQ PAMNTLTDKG HVSQNDLNRT NKAFKGMGPE NSPSTSASAD RSVDRCNQVN SASSRLELLH KVDPSPENSS
0801: ETNVTGIHEA NAFADYGGQF RHNQASASQG FNLQLAPPSQ LAPSPDNMQF FRNSLQPLNS FHTGPEKGGT SQSRFAPWGS NQSFHQSTHQ GPFPGILGGS
0901: NMTSGFPYSR GYHQNQQMAV GTRQSAAINS VNSSSELSTP AVKERDESSD FDQRGHSAEG FRMLSASQPL VASSSPQQNS SSGMMSDPPA GISAPQLRFW
1001: NQPLPQSDIL RPHPSPGNNM AVSFSRQEKT NQLSSQNGDV SLSGRDIVNM HELQSKDMGA KQTSNVASMF SKMVQSNNQS FGRSLPSNNF PKDSLRHDEQ
1101: MAGSGEGDAP KMTVKRVENS AIDPQKVAPK GEQQSPSKSD SLVRDGLNHR ESVNHMPYFG QNVTQSFSTK NHSASVGADH QQISPQMAPS WYSQYGTFKN
1201: GLVQPVNDTG RFTPLKIGEQ SSNVGSSVDG THSVQLSQHF KMQQMSGSTL GAEIPSSESL PHGATEQLLK VNKPKKRKTA TSELIPWNKE VMQGHQRLKT
1301: LGEAEVDWAR ATNRFAEKVE FETLLEDSPP IKSKRRLVYT TQLMQQLCSP PPARVISLVA SSNYEFVAYT AARGALGDAC SSSSTDRSEG FWPPNISNPL
1401: SERTKTEKIS DQYISKAAED FISRTRKLET DFARLENGTT IPDLRVEVQD LEKFAVINRF AKFHPPSMDR TLNSVRINPQ RYVTVAPMPQ NIPDRVQCLS
1501: L
0101: TNGYMHGNLG LQTMPNEANV LGMDVESSRD KLSERGFTPD LHKIPTRFEM GESPVNYDFF GGQQQSNTQL PGMLQPLPRQ QVSFNDMQLL KQQVMVKQMH
0201: EYQMQQQLQK QRLEARQLNS LNRNAVNGSC VSDNQSHMIN GIPLQNASSN WLQPDLMTGN TNWMHRGISP AVQGSSSGLM ITPDHGQANL MAQQFEPSLY
0301: GMPVSGTNAP HNAFSSSQMN RLAAQHGSAN RTSSVTNQPT SFLNQGDVQD SHMLPRSTYP EKLLFSQTSV PSSNSMPNFE SLQEDDSRER NISVQAKFGQ
0401: MEGSGPSEQS FIKAPENINA LQKSTALDPT EEKILFGSDD NLWEAFGNST DMSLTGNLMS SSSDLFDGCP SLQSGSWSAL MQSAVAETSS DDAGVHEWAN
0501: NSTGPHANFH RGNMAQDLGA KTSNTLSGRV HSDSTRTAVQ HLQDRGNSVA DNGLLENSMA QRNLMAENIF HSSSSGVDGQ NNSCSIRKNE GVEDRLGIWK
0601: AASNPNLVAL KEQNPSMQRT SYGFGIAGAG NDSRHLDNNS LEKAIPHLNS RDGSQILESY SSNNAGSNEM VNTRDLSTLP GGKETQSGHV GVRPSIPRKF
0701: QYHPMGNIDV TDEPCRGKVS RFGQSQSLGQ PAMNTLTDKG HVSQNDLNRT NKAFKGMGPE NSPSTSASAD RSVDRCNQVN SASSRLELLH KVDPSPENSS
0801: ETNVTGIHEA NAFADYGGQF RHNQASASQG FNLQLAPPSQ LAPSPDNMQF FRNSLQPLNS FHTGPEKGGT SQSRFAPWGS NQSFHQSTHQ GPFPGILGGS
0901: NMTSGFPYSR GYHQNQQMAV GTRQSAAINS VNSSSELSTP AVKERDESSD FDQRGHSAEG FRMLSASQPL VASSSPQQNS SSGMMSDPPA GISAPQLRFW
1001: NQPLPQSDIL RPHPSPGNNM AVSFSRQEKT NQLSSQNGDV SLSGRDIVNM HELQSKDMGA KQTSNVASMF SKMVQSNNQS FGRSLPSNNF PKDSLRHDEQ
1101: MAGSGEGDAP KMTVKRVENS AIDPQKVAPK GEQQSPSKSD SLVRDGLNHR ESVNHMPYFG QNVTQSFSTK NHSASVGADH QQISPQMAPS WYSQYGTFKN
1201: GLVQPVNDTG RFTPLKIGEQ SSNVGSSVDG THSVQLSQHF KMQQMSGSTL GAEIPSSESL PHGATEQLLK VNKPKKRKTA TSELIPWNKE VMQGHQRLKT
1301: LGEAEVDWAR ATNRFAEKVE FETLLEDSPP IKSKRRLVYT TQLMQQLCSP PPARVISLVA SSNYEFVAYT AARGALGDAC SSSSTDRSEG FWPPNISNPL
1401: SERTKTEKIS DQYISKAAED FISRTRKLET DFARLENGTT IPDLRVEVQD LEKFAVINRF AKFHPPSMDR TLNSVRINPQ RYVTVAPMPQ NIPDRVQCLS
1501: L
Arabidopsis Description
Dentin sialophosphoprotein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SD86]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.