Factsheet for TraesCS3B01G497000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G449800.1	Wheat	cytosol, mitochondrion, plasma membrane	66.58	93.26
TraesCS3B01G496700.1	Wheat	cytosol	76.71	74.45
TraesCS3B01G496900.1	Wheat	cytosol	71.14	69.04
TraesCS3B01G466200.1	Wheat	cytosol	66.58	63.22
TraesCS3B01G496600.2	Wheat	cytosol	66.33	62.38
TraesCS3B01G497100.1	Wheat	cytosol, nucleus, peroxisome	53.16	56.45
TraesCS6B01G032800.1	Wheat	cytosol	48.61	48.0
TraesCS4B01G392900.1	Wheat	cytosol, peroxisome, plastid	47.09	46.15
TraesCS5B01G357900.1	Wheat	cytosol, peroxisome, plastid	52.66	46.12
TraesCS3B01G128100.1	Wheat	cytosol	29.87	45.21
TraesCS6B01G095400.1	Wheat	cytosol	34.94	43.81
TraesCS6B01G128500.1	Wheat	cytosol	45.57	43.27
TraesCS1B01G423000.1	Wheat	cytosol, nucleus, peroxisome	45.82	42.79
TraesCS6B01G095500.1	Wheat	cytosol	43.54	42.68
TraesCS1B01G083300.1	Wheat	cytosol	27.09	42.29
TraesCS6B01G032600.1	Wheat	cytosol	41.27	41.37
TraesCS6B01G017300.1	Wheat	cytosol	44.3	40.89
TraesCS6B01G032500.1	Wheat	cytosol	40.25	40.36
EES04945	Sorghum	cytosol	42.53	40.0
TraesCS6B01G128400.1	Wheat	cytosol	46.58	39.83
TraesCS6B01G120300.1	Wheat	cytosol	14.94	39.6
TraesCS4B01G391600.1	Wheat	cytosol	46.33	39.27
TraesCS6B01G019500.1	Wheat	cytosol	24.56	38.34
Os02t0288925-00	Rice	cytosol	38.73	36.08
TraesCS6B01G120000.1	Wheat	cytosol	15.95	36.0
TraesCS3B01G504600.1	Wheat	cytosol, peroxisome, plastid	34.18	32.14
TraesCS3B01G504400.1	Wheat	cytosol	32.91	31.78
TraesCS3B01G506300.1	Wheat	cytosol	32.41	31.6
TraesCS3B01G504300.1	Wheat	cytosol	33.16	31.57
TraesCS3B01G505900.1	Wheat	cytosol	32.41	31.45
TraesCS3B01G506100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.15	31.05
TraesCS7B01G400700.1	Wheat	cytosol	18.23	27.69
TraesCS3B01G505600.1	Wheat	cytosol, golgi, peroxisome	16.96	27.35
TraesCS5B01G497300.1	Wheat	cytosol	49.11	22.85
TraesCS7B01G481600.2	Wheat	cytosol, mitochondrion, nucleus, plastid	46.84	19.43

Protein Annotations

EnsemblPlants:TraesCS3B01G497000.1	EnsemblPlantsGene:TraesCS3B01G497000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
PANTHER:PTHR33207	PANTHER:PTHR33207:SF22	SUPFAM:SSF81383	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3B:+:740514559..740518315

Molecular Weight (calculated)

44500.6 Da

IEP (calculated)

5.961

GRAVY (calculated)

0.002

Length

395 amino acids

Sequence
(BLAST)

001: MEGEARRPPA CVSKVLDDDN LLTEIIVRVG FPTSLVRAAG VCRRWLSHAS DRALLRRFRE LHPPRLLGFY IVEWGYPAAA RFFPILPQPP ELAAVVRRAN
101: FSEGLPFSKK EGDTMVGCSN GSVFTRRLNF TSRRNFDLDT YELVFTVHSP LRYEGGMAVL PGLHLRMPSL YSWAQLFSKE DGDGSSYFYV TVEALDTMVP
201: TLNVYMLGNG DAAWHKHLTL ASDLLWRPSS PKGVLVDNKI YVATYNAIVV LDLTSSTLST IQLPHGVGFG LGATVLSRAD DGSVLYLIHI KELQLHIWLH
301: NGDNWLLVDT ICLSEMCASF PEDELTSIRI NHVGDYNEYV FLEMDQYALY LDVKCRTLRK VCEMTADEYS LGDIYPFMMS WPPIFPTLSP ARDAT

Best Arabidopsis Sequence Match ( AT3G16210.1 )
(BLAST)

001: MSKFLPEELA IEILVRLSMK DLARFRCVCK TWRDLINDPG FTETYRDMSP AKFVSFYDKN FYMLDVEGKH PVITNKLDFP LDQSMIDEST CVLHCDGTLC
101: VTLKNHTLMV WNPFSKQFKI VPNPGIYQDS NILGFGYDPV HDDYKVVTFI DRLDVSTAHV FEFRTGSWGE SLRISYPDWH YRDRRGTFLD QYLYWIAYRS
201: SADRFILCFN LSTHEYRKLP LPVYNQGVTS SWLGVTSQKL CITEYEMCKK EIRISVMEKT GSWSKIISLS MSSFISVQDR IYDYQVEFVS FTRKNDLVVT
301: FTGYNDHFEM EPEERTKKKM FLYKTGNERS EEVRFCNPLA GLRFLCECVE TLKIVNRIFI

Arabidopsis Description

Putative F-box protein At3g16210 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.