Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G065900.1 | Wheat | cytosol | 91.3 | 50.33 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 47.83 | 47.83 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 46.64 | 45.21 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 53.75 | 43.17 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 62.85 | 37.59 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 64.03 | 35.06 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 47.04 | 29.75 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 47.04 | 29.53 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 47.04 | 29.53 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 28.06 | 28.98 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 29.25 | 28.46 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 46.64 | 27.57 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 42.69 | 27.41 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 42.69 | 27.41 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 43.87 | 27.27 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 42.29 | 27.09 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 49.8 | 27.04 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 44.27 | 26.92 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 47.04 | 26.39 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 42.29 | 25.48 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 40.71 | 25.31 |
| EES04945 | Sorghum | cytosol | 41.9 | 25.24 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 41.11 | 25.0 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 35.97 | 24.46 |
| Os02t0288925-00 | Rice | cytosol | 35.57 | 21.23 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 28.46 | 17.78 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 28.46 | 17.14 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 28.06 | 17.11 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 26.88 | 16.63 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 26.48 | 16.38 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 25.69 | 15.97 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 41.11 | 12.25 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 43.87 | 11.66 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 1.98 | 2.86 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G083300.1 | EnsemblPlantsGene:TraesCS1B01G083300 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr1B:+:67411616..67413156
Molecular Weight (calculated)
28829.3 Da
IEP (calculated)
7.241
GRAVY (calculated)
0.095
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MDILPPLPSV QNSSYHMFST ILSKEDGAGG MSYVYMLVEG VDENKVFRVR VYMLQRGVWC MHTSSTTKIP LLLLPRKVLL VDNKIYIADK FSDDIIVLEL
101: PASSFSKISV PQGVQCHHYT TILSRADDAS GVYLTHVHVK ELQLCIWLHK GHNWLLVNTI CLRQMWANLR MLDHTLGDED VDFHFLSHVG DNAEFVFLEM
201: SNCTLHLDVT SRTLRKVHGT PIKNGHFIAV HPFMMIWPPI FPLLKDATAR NGM
101: PASSFSKISV PQGVQCHHYT TILSRADDAS GVYLTHVHVK ELQLCIWLHK GHNWLLVNTI CLRQMWANLR MLDHTLGDED VDFHFLSHVG DNAEFVFLEM
201: SNCTLHLDVT SRTLRKVHGT PIKNGHFIAV HPFMMIWPPI FPLLKDATAR NGM
001: MLDLNLGILS THNEDEDCKV PTSIFIQEED SINPSNDNLS LITFGILKRN VEILPPPPPP PPPPPPSENE LSGPGNEWLD LSSMQRNKQE TLVMKKKSRR
101: GPRSRSSHYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA YTAARAYDRA AIRFRGLQAD INFIVDDYKQ DIEKMKNLSK EEFVQSLRRA SASLARGGSK
201: YKNTHMRNDH IHLFQNRGLN AAAAKCNEIR KMEGDIKLGA HSKGNEHNDL ELSLGISSSS KVRILEPADY YMGLNRSVTS LHGKPLPGYL PITEIKPLKT
301: VVASSGFPFI TMINPSSLSL SCFDP
101: GPRSRSSHYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA YTAARAYDRA AIRFRGLQAD INFIVDDYKQ DIEKMKNLSK EEFVQSLRRA SASLARGGSK
201: YKNTHMRNDH IHLFQNRGLN AAAAKCNEIR KMEGDIKLGA HSKGNEHNDL ELSLGISSSS KVRILEPADY YMGLNRSVTS LHGKPLPGYL PITEIKPLKT
301: VVASSGFPFI TMINPSSLSL SCFDP
Arabidopsis Description
SNZAP2-like ethylene-responsive transcription factor SNZ [Source:UniProtKB/Swiss-Prot;Acc:Q6PV67]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.