Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G032600.1 | Wheat | cytosol | 95.94 | 95.94 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 83.25 | 89.86 |
| TraesCS6A01G023800.1 | Wheat | cytosol | 86.29 | 86.73 |
| HORVU7Hr1G095850.1 | Barley | cytosol | 83.5 | 86.13 |
| HORVU6Hr1G004080.1 | Barley | cytosol | 52.28 | 78.63 |
| HORVU6Hr1G004190.1 | Barley | extracellular | 26.14 | 70.07 |
| TraesCS6B01G032800.1 | Wheat | cytosol | 48.73 | 48.0 |
| TraesCS1B01G423000.1 | Wheat | cytosol, nucleus, peroxisome | 47.46 | 44.21 |
| TraesCS4B01G392900.1 | Wheat | cytosol, peroxisome, plastid | 45.18 | 44.17 |
| TraesCS3B01G128100.1 | Wheat | cytosol | 29.19 | 44.06 |
| TraesCS6B01G017300.1 | Wheat | cytosol | 47.46 | 43.69 |
| TraesCS6B01G019500.1 | Wheat | cytosol | 27.92 | 43.48 |
| TraesCS1B01G083300.1 | Wheat | cytosol | 27.41 | 42.69 |
| TraesCS3B01G466200.1 | Wheat | cytosol | 44.42 | 42.07 |
| TraesCS5B01G357900.1 | Wheat | cytosol, peroxisome, plastid | 46.95 | 41.02 |
| TraesCS3B01G496600.2 | Wheat | cytosol | 43.65 | 40.95 |
| TraesCS6B01G128500.1 | Wheat | cytosol | 42.89 | 40.62 |
| TraesCS3B01G497000.1 | Wheat | cytosol | 40.36 | 40.25 |
| TraesCS3B01G496900.1 | Wheat | cytosol | 41.37 | 40.05 |
| TraesCS3B01G497100.1 | Wheat | cytosol, nucleus, peroxisome | 37.31 | 39.52 |
| TraesCS4B01G391600.1 | Wheat | cytosol | 46.7 | 39.48 |
| TraesCS6B01G128400.1 | Wheat | cytosol | 46.19 | 39.39 |
| TraesCS6B01G095500.1 | Wheat | cytosol | 39.85 | 38.96 |
| TraesCS3B01G496700.1 | Wheat | cytosol | 40.1 | 38.82 |
| TraesCS6B01G095400.1 | Wheat | cytosol | 30.96 | 38.73 |
| EES04945 | Sorghum | cytosol | 38.58 | 36.19 |
| TraesCS6B01G120000.1 | Wheat | cytosol | 15.74 | 35.43 |
| TraesCS6B01G120300.1 | Wheat | cytosol | 13.2 | 34.9 |
| Os02t0288925-00 | Rice | cytosol | 35.03 | 32.55 |
| TraesCS3B01G506300.1 | Wheat | cytosol | 33.25 | 32.35 |
| TraesCS3B01G506100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 32.99 | 31.78 |
| TraesCS3B01G504300.1 | Wheat | cytosol | 32.74 | 31.08 |
| TraesCS7B01G400700.1 | Wheat | cytosol | 19.8 | 30.0 |
| TraesCS3B01G504600.1 | Wheat | cytosol, peroxisome, plastid | 31.73 | 29.76 |
| TraesCS3B01G504400.1 | Wheat | cytosol | 30.71 | 29.58 |
| TraesCS3B01G505900.1 | Wheat | cytosol | 30.46 | 29.48 |
| TraesCS3B01G505600.1 | Wheat | cytosol, golgi, peroxisome | 18.27 | 29.39 |
| TraesCS5B01G497300.1 | Wheat | cytosol | 41.62 | 19.32 |
| TraesCS7B01G481600.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 44.67 | 18.49 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G032500.1 | EnsemblPlantsGene:TraesCS6B01G032500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:-:18942055..18944297
Molecular Weight (calculated)
45321.2 Da
IEP (calculated)
7.673
GRAVY (calculated)
-0.073
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVSKVLED DDLLTEILLR TVFTTTLLNS ALVCTRWLAH VSDRAFLHRF REIHPPRLLG FYINKGEHTP NFIPILPQPR ELTAVIQRAT SSFGTYQRVP
101: SVPTYILGCW NGNVLIRQHD EIGTTFAVHK VVCPKRGMDI LPPFPRPQSQ YLFDGTTYSK ILPKEEGDEL SYLYVLMHQT RDGKHRVYIY ILKHGIWRMN
201: HSLIVQQPPR PWSVLKSVLS SNKIYVPAGW SNIIVLDLVA SSFSIIELPE GMEYGERNTI LSQADDAAGV YLIVVKKFQL RIWLHNGYTW LLMDTVYLRE
301: MFVDLSVSDG NASLLINQAG DNAEFVFLDM GRCTFLLDIK CRTMHKVYEK EDGDKFFCEI HPLMMIWPPV FHAPKDDPTR NAMLRLKIKD MDGH
101: SVPTYILGCW NGNVLIRQHD EIGTTFAVHK VVCPKRGMDI LPPFPRPQSQ YLFDGTTYSK ILPKEEGDEL SYLYVLMHQT RDGKHRVYIY ILKHGIWRMN
201: HSLIVQQPPR PWSVLKSVLS SNKIYVPAGW SNIIVLDLVA SSFSIIELPE GMEYGERNTI LSQADDAAGV YLIVVKKFQL RIWLHNGYTW LLMDTVYLRE
301: MFVDLSVSDG NASLLINQAG DNAEFVFLDM GRCTFLLDIK CRTMHKVYEK EDGDKFFCEI HPLMMIWPPV FHAPKDDPTR NAMLRLKIKD MDGH
001: MEKSDDLVAR IYPQFNKVFH RSVASLSQSE SGASKGLLLL AILQFFLDFG DMVLHDSDPS LRTFFRSCLS REFSDAAVAE ATCEFLVVNQ RKLLASFPNL
101: LPQFFPLLLK LIAWNWEKLE KSFLKIFPGL ISPGSFLPLF PSIVDLPILV VALEKVERSS GSGSRVGGSI ASIQKSAAPE MLLALMDEAY TGSTIGDGGD
201: DSESEDNNTI DVADPLFLEL LKDENDGLAE RHRASPTLNA ALQAAASGPR SERMKQTLKI APRLLDVYFS VTLRDANDSL ICALIPLLMT RNSTMFPDKI
301: FSHEIRRRLL EFVLAAFQRS PNFIALLKKP IIDRLGEAYD DVAKRELALQ LCWAIGEYGG GGESHKEAAR ELFESLELLV YENLSSSRLG LRQESGNGSR
401: RTTQSRLLCF VVTAIAKLAT YHRELLPRAR VALGKVVKSR ISDARVWRRA HDYLGLMNEP GICWSVLGPS RVSEKRFPGT VNWSEGGQKM VAHIPFHILS
501: EQGGPPFHDF AFSDIIPKN
101: LPQFFPLLLK LIAWNWEKLE KSFLKIFPGL ISPGSFLPLF PSIVDLPILV VALEKVERSS GSGSRVGGSI ASIQKSAAPE MLLALMDEAY TGSTIGDGGD
201: DSESEDNNTI DVADPLFLEL LKDENDGLAE RHRASPTLNA ALQAAASGPR SERMKQTLKI APRLLDVYFS VTLRDANDSL ICALIPLLMT RNSTMFPDKI
301: FSHEIRRRLL EFVLAAFQRS PNFIALLKKP IIDRLGEAYD DVAKRELALQ LCWAIGEYGG GGESHKEAAR ELFESLELLV YENLSSSRLG LRQESGNGSR
401: RTTQSRLLCF VVTAIAKLAT YHRELLPRAR VALGKVVKSR ISDARVWRRA HDYLGLMNEP GICWSVLGPS RVSEKRFPGT VNWSEGGQKM VAHIPFHILS
501: EQGGPPFHDF AFSDIIPKN
Arabidopsis Description
AP-5 complex subunit zeta-1 [Source:UniProtKB/TrEMBL;Acc:Q8H1F1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.