Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- vacuole 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G095850.1 | Barley | cytosol | 80.53 | 55.24 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 81.3 | 54.06 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 80.15 | 53.3 |
| TraesCS6A01G023900.1 | Wheat | cytosol | 80.15 | 53.3 |
| TraesCS6B01G032600.1 | Wheat | cytosol | 79.77 | 53.05 |
| TraesCS6B01G032500.1 | Wheat | cytosol | 78.63 | 52.28 |
| TraesCS6A01G023800.1 | Wheat | cytosol | 77.86 | 52.04 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 70.23 | 50.41 |
| HORVU6Hr1G018030.1 | Barley | cytosol | 43.51 | 26.15 |
| HORVU6Hr1G016700.2 | Barley | cytosol, peroxisome, plastid | 40.08 | 25.8 |
| HORVU6Hr1G004190.1 | Barley | extracellular | 13.36 | 23.81 |
| EES04945 | Sorghum | cytosol | 35.88 | 22.38 |
| Os02t0288925-00 | Rice | cytosol | 33.21 | 20.52 |
| HORVU3Hr1G099010.2 | Barley | cytosol | 27.1 | 17.03 |
| HORVU0Hr1G014790.1 | Barley | endoplasmic reticulum, plasma membrane | 40.46 | 16.49 |
| HORVU6Hr1G002130.4 | Barley | plastid | 40.46 | 12.41 |
| HORVU5Hr1G114130.1 | Barley | cytosol, nucleus, plastid | 37.4 | 10.86 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G004080.1 | EnsemblPlantsGene:HORVU6Hr1G004080 | PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | UniParc:UPI000B46432A |
| UniProt:A0A287T6J3 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:9025733..9026874
Molecular Weight (calculated)
30011.9 Da
IEP (calculated)
9.332
GRAVY (calculated)
0.008
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVSKVLED DDLLTKILLH TILPTTLVNS VIVCTRWLTH ASDRAFLCRF REIHPPHLLG FYINKGQNTP QFIPILPQPL DLASVIRRAT SRLGIYQKVS
101: PVPTYILGCR NGNNLIRQHD KIGTTFAVHK VVCPERGMDI LPPFPLPQFQ YLFDTTYSRI MSKREGNNLS YLYVLMHQTR DRKHRVYIYI LRHGIWCMNH
201: ILTIDQPPRP WSVLKCVLSD NKIYVPAGWS NIVVLDLAAS SLSVIELLEG MEYGERNHIV TG
101: PVPTYILGCR NGNNLIRQHD KIGTTFAVHK VVCPERGMDI LPPFPLPQFQ YLFDTTYSRI MSKREGNNLS YLYVLMHQTR DRKHRVYIYI LRHGIWCMNH
201: ILTIDQPPRP WSVLKCVLSD NKIYVPAGWS NIVVLDLAAS SLSVIELLEG MEYGERNHIV TG
001: MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P
101: DDPSGYAYDP IIRKWYSFDL PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN RANQAVNRAN RSYSVSIVKS
201: KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR
301: ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG
401: FCFEPRLEIA P
Arabidopsis Description
HWSGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.