Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G504300.1 | Wheat | cytosol | 88.71 | 94.7 |
| TraesCS3A01G461700.1 | Wheat | cytosol | 87.58 | 93.27 |
| HORVU3Hr1G099010.2 | Barley | cytosol | 79.01 | 83.93 |
| TraesCS3D01G456200.1 | Wheat | cytosol | 60.72 | 66.26 |
| TraesCS3D01G457100.1 | Wheat | cytosol | 58.47 | 61.67 |
| TraesCS3D01G457000.1 | Wheat | plasma membrane | 56.43 | 61.12 |
| TraesCS3D01G455200.1 | Wheat | cytosol | 56.21 | 60.88 |
| TraesCS3D01G455400.1 | Wheat | cytosol, peroxisome, plastid | 56.43 | 60.1 |
| TraesCS3D01G456800.1 | Wheat | cytosol | 59.59 | 58.41 |
| TraesCS3D01G456600.1 | Wheat | cytosol | 51.92 | 58.08 |
| TraesCS3D01G456400.1 | Wheat | cytosol, plastid | 18.96 | 54.9 |
| EES04961 | Sorghum | cytosol, peroxisome, plastid | 34.99 | 39.85 |
| TraesCS5D01G363300.1 | Wheat | cytosol, nucleus, peroxisome | 30.47 | 34.53 |
| TraesCS6D01G023200.1 | Wheat | cytosol | 30.25 | 33.5 |
| TraesCS6D01G055300.1 | Wheat | cytosol | 30.25 | 33.33 |
| TraesCS1D01G402800.1 | Wheat | cytosol, nucleus, peroxisome | 25.73 | 32.85 |
| TraesCS7D01G484000.1 | Wheat | cytosol, peroxisome, plastid | 30.02 | 32.68 |
| TraesCS3D01G449600.1 | Wheat | cytosol | 29.57 | 32.67 |
| TraesCS6D01G027300.1 | Wheat | cytosol | 26.41 | 32.05 |
| TraesCS6D01G027100.1 | Wheat | cytosol | 28.22 | 31.73 |
| TraesCS6D01G027200.1 | Wheat | cytosol | 27.99 | 31.47 |
| TraesCS6D01G080600.1 | Wheat | cytosol | 16.7 | 31.09 |
| TraesCS3D01G449700.1 | Wheat | cytosol | 28.44 | 30.96 |
| TraesCS3D01G449500.1 | Wheat | cytosol | 29.35 | 30.52 |
| TraesCS3D01G110900.2 | Wheat | cytosol | 29.35 | 30.3 |
| TraesCS6D01G027500.1 | Wheat | cytosol | 29.8 | 30.07 |
| TraesCS1D01G065900.1 | Wheat | cytosol | 31.15 | 30.07 |
| TraesCS6D01G069200.1 | Wheat | cytosol | 20.77 | 29.49 |
| TraesCS7D01G483700.1 | Wheat | cytosol, mitochondrion | 29.57 | 29.31 |
| TraesCS5D01G363100.1 | Wheat | cytosol | 29.8 | 29.01 |
| TraesCS2D01G064400.1 | Wheat | cytosol | 28.89 | 28.7 |
| Os04t0313500-00 | Rice | cytosol | 34.31 | 28.25 |
| TraesCS6D01G044000.1 | Wheat | cytosol | 20.32 | 27.69 |
| TraesCS5D01G497500.1 | Wheat | cytosol | 14.67 | 27.66 |
| TraesCS6D01G080900.1 | Wheat | cytosol | 16.48 | 26.45 |
| TraesCS3D01G449800.1 | Wheat | cytosol, mitochondrion, plasma membrane | 16.7 | 26.24 |
| TraesCS2D01G057400.2 | Wheat | cytosol | 25.28 | 26.23 |
| TraesCS7D01G484100.1 | Wheat | cytosol | 15.8 | 25.74 |
| TraesCS6D01G082100.7 | Wheat | cytosol | 27.54 | 14.34 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G455100.1 | EnsemblPlantsGene:TraesCS3D01G455100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR33207 | PANTHER:PTHR33207:SF22 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3D:-:561453080..561456477
Molecular Weight (calculated)
48890.4 Da
IEP (calculated)
9.329
GRAVY (calculated)
0.063
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRGRLCKV TRSATEILLR LKIPQNMDGY RRAPPPAAAA ASAASVLGDD DLLREIFIRL GFPNCLVRAA LVSQRWLLNA SDPAFLRRFR ERNPPRVLGV
101: CAGYSVRPFK FVPLPQPPEL AALSRRAASS CAYAFARGGQ RIEHCRNGRL IVESLRKGTF KHSVLAPLLY GEPEAVLPPI PPPRRHPQEL TQGSFTQIFL
201: PEDGGREGIT LVNLWKVQRE VRAEVYVLGA AGWGVPTTAI TEIELQYAAT FFAKMLPPVH GKVFVVTGFG YTLGLDLATA TFVMLQLPAG VRYNYMLSSA
301: EGSGIYLVTV DRFQLSVWLH RMAGDNHGAG GWLLVDTFSV LEACARLAGD SWVPCEYLNV AAVGDNADFV FLDHPSSGVI FYVHLSSRVV KMVYQRTADE
401: HECRSVAVRI SPVMTIWPPI FPALNIGHDQ EGIVRAVRSL DRR
101: CAGYSVRPFK FVPLPQPPEL AALSRRAASS CAYAFARGGQ RIEHCRNGRL IVESLRKGTF KHSVLAPLLY GEPEAVLPPI PPPRRHPQEL TQGSFTQIFL
201: PEDGGREGIT LVNLWKVQRE VRAEVYVLGA AGWGVPTTAI TEIELQYAAT FFAKMLPPVH GKVFVVTGFG YTLGLDLATA TFVMLQLPAG VRYNYMLSSA
301: EGSGIYLVTV DRFQLSVWLH RMAGDNHGAG GWLLVDTFSV LEACARLAGD SWVPCEYLNV AAVGDNADFV FLDHPSSGVI FYVHLSSRVV KMVYQRTADE
401: HECRSVAVRI SPVMTIWPPI FPALNIGHDQ EGIVRAVRSL DRR
001: MEQQKQKKRK VVSKSKRTQS KSASSLPLDL TSEILLRLPE KSIARFRCVS KLWLSITTDP YFINLFETRS PRPSLLVCFI ENDKLFVSSI PQHLHSLQNS
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ
101: KRSYSSSQLF IVIIWNYQKD VGLICFKTSK MPIVWNPSKR QLITLPIPRL SWNNIIVFLG YDPVEGKHKV MCLPFRRSSD VCQVLTLGPA QEFSWITVKT
201: YHKHCSDYQS SGRCIKGVVY YIAQVYHTHA WVLMCFDVRS EKFDMIKLHA DIYREILITY EGRIACVEKR TTKDDYIALC ILEDAKKDKW SSKDILAPFG
301: HFDERLRTFF QLKGCTHDGE FIFVSSTFRK MDYILFFDPV KKTFRRFELK EIADDQARVN NGDPYGPIFA FCAFLDHVES QMSLQ
Arabidopsis Description
Putative F-box protein At1g47765 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.