Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G445000.1 | Wheat | cytosol | 49.55 | 32.48 |
| Os04t0369000-01 | Rice | cytosol, plasma membrane | 4.53 | 10.95 |
| TraesCSU01G200200.1 | Wheat | cytosol, vacuole | 5.14 | 9.71 |
| TraesCSU01G211600.1 | Wheat | cytosol | 6.95 | 8.61 |
| TraesCSU01G255000.1 | Wheat | cytosol | 5.74 | 8.52 |
| TraesCS6B01G013900.1 | Wheat | cytosol | 3.32 | 7.75 |
| TraesCSU01G192700.1 | Wheat | cytosol | 8.76 | 6.92 |
| TraesCSU01G050800.1 | Wheat | cytosol, extracellular, nucleus | 1.51 | 1.53 |
Protein Annotations
| EnsemblPlants:TraesCSU01G189900.1 | EnsemblPlantsGene:TraesCSU01G189900 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 | TIGR:cd09612 | MapMan:35.1 |
Description
No Description!
Coordinates
chrUn:+:286185706..286190564
Molecular Weight (calculated)
35275.4 Da
IEP (calculated)
6.895
GRAVY (calculated)
0.015
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPWGGIGGQ ACRIMVEPVC LNSITIRSGK TLLAIAFSYS DKHGKPHHAG PWGANGSSFH TILLGPSEHL IQISGTVDMN IEHSTDVITS ITFTTNMSVY
101: GPFGTREGLP FRSKLVSNGS IVGFFVRAMC LIDAIGIYVK PEREPMEKQG LITKTGPWGG YNGYLYDVDV SPRRLVSVVV RCSEVIDSIA FTYIDCDGRQ
201: HSAGPWGGHG AIRDGGTIHT IVLGRSEYLK EISGTVGPSP HPDIVMSLLF VTNIGSYGPF GGGGGTTFCS PELKNGSIIG FFAHAGQNVD AIGVYVDAIK
301: EKENDGVACA NPKLQGDVMD LDKVSSPRIK I
101: GPFGTREGLP FRSKLVSNGS IVGFFVRAMC LIDAIGIYVK PEREPMEKQG LITKTGPWGG YNGYLYDVDV SPRRLVSVVV RCSEVIDSIA FTYIDCDGRQ
201: HSAGPWGGHG AIRDGGTIHT IVLGRSEYLK EISGTVGPSP HPDIVMSLLF VTNIGSYGPF GGGGGTTFCS PELKNGSIIG FFAHAGQNVD AIGVYVDAIK
301: EKENDGVACA NPKLQGDVMD LDKVSSPRIK I
001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.