Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G189900.1 | Wheat | cytosol | 32.48 | 49.55 |
| TraesCS6B01G013900.1 | Wheat | cytosol | 4.55 | 16.2 |
| TraesCS3A01G073900.1 | Wheat | cytosol | 5.35 | 13.43 |
| TraesCS6A01G269800.1 | Wheat | cytosol | 7.13 | 13.19 |
| TraesCS7A01G540400.2 | Wheat | cytosol | 7.33 | 12.76 |
| TraesCS2A01G024800.2 | Wheat | cytosol, nucleus, plastid | 3.56 | 12.08 |
| TraesCS4A01G476000.1 | Wheat | cytosol | 10.89 | 11.9 |
| TraesCS7A01G540700.1 | Wheat | plasma membrane | 7.72 | 11.44 |
| TraesCS5A01G444900.1 | Wheat | cytosol | 10.89 | 11.29 |
| TraesCS7A01G540300.1 | Wheat | cytosol | 10.49 | 11.0 |
| TraesCS5A01G524700.2 | Wheat | nucleus | 20.79 | 10.66 |
| TraesCS7A01G540500.1 | Wheat | cytosol, extracellular, peroxisome | 3.17 | 10.53 |
| TraesCS2A01G368500.1 | Wheat | cytosol | 4.36 | 8.84 |
| Os04t0369000-01 | Rice | cytosol, plasma membrane | 2.38 | 8.76 |
| TraesCS7A01G300700.1 | Wheat | cytosol | 3.76 | 7.82 |
| TraesCS7A01G539900.1 | Wheat | cytosol | 11.68 | 7.51 |
| TraesCS6A01G237600.1 | Wheat | cytosol, golgi, plasma membrane | 3.37 | 7.46 |
| TraesCS6A01G004500.1 | Wheat | cytosol | 11.68 | 7.43 |
| TraesCS7A01G301500.1 | Wheat | cytosol, golgi, plasma membrane | 3.37 | 7.14 |
| TraesCS7A01G541400.1 | Wheat | cytosol | 12.28 | 6.4 |
| TraesCS2A01G412000.1 | Wheat | cytosol, plastid | 2.77 | 5.79 |
| TraesCS6A01G247700.1 | Wheat | cytosol | 2.57 | 5.56 |
| TraesCS7A01G540200.3 | Wheat | cytosol | 6.14 | 4.9 |
| TraesCS6A01G242200.1 | Wheat | cytosol, golgi, plasma membrane | 1.98 | 4.31 |
| TraesCS4A01G479800.1 | Wheat | cytosol | 11.68 | 4.13 |
| TraesCS4A01G497800.1 | Wheat | cytosol | 11.49 | 4.09 |
| TraesCS3A01G467600.2 | Wheat | cytosol | 2.77 | 3.86 |
| TraesCS4A01G309200.1 | Wheat | cytosol, nucleus, plasma membrane | 10.89 | 2.71 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G445000.1 | EnsemblPlantsGene:TraesCS5A01G445000 | Gene3D:2.100.10.30 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | PFAM:PF01419 |
| PFscan:PS51752 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 | TIGR:cd09612 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5A:-:624744063..624758677
Molecular Weight (calculated)
53519.9 Da
IEP (calculated)
5.859
GRAVY (calculated)
-0.134
Length
505 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNASIVGFF GRSGHVVDAI GLYVNLARGP MEKQDLITKV GLWGGNSGQA HDLDVVPRRL ISVVVRSGEV IDSLKFTYSD CDGHQHTAGP WGGSDASQSM
101: NNHMILLGRS EVVKEVSGTI GPNSSVPDFV SSLLLATNTS SHGPFGEGRG IPFRIPVQDN DSIVGFFAQA EKHINAIGFY LESMEIKDND GPPCANTKLE
201: GDIKEPYMTC ITKIGPWGAN NHNYKDIEVA PLCLNSITIR SGDVVFSLAF SYSDNNGKQH HAGPWGASAG FSYGSFDTIL LGPSEFLAEV SGTTGSSTQY
301: SSDVVTSVMF ITNARRYGPF GGGGGIPFHS PVLSNGSIVS FFANTGRVVD AIGVYVKPND RGSTKEQDPV TKIGPWGGGS GRPSDVDVLP RRLISVVIHS
401: GRVINSLMFT YSDCDGQQHS GGPWGGTANP LEGSSHTILL GQSDFLMEVS GTVGWNSENS DVVTSLYFVT NTGSYGPYGN GGGTRFRSPL RAMVVLSASL
501: PMLET
101: NNHMILLGRS EVVKEVSGTI GPNSSVPDFV SSLLLATNTS SHGPFGEGRG IPFRIPVQDN DSIVGFFAQA EKHINAIGFY LESMEIKDND GPPCANTKLE
201: GDIKEPYMTC ITKIGPWGAN NHNYKDIEVA PLCLNSITIR SGDVVFSLAF SYSDNNGKQH HAGPWGASAG FSYGSFDTIL LGPSEFLAEV SGTTGSSTQY
301: SSDVVTSVMF ITNARRYGPF GGGGGIPFHS PVLSNGSIVS FFANTGRVVD AIGVYVKPND RGSTKEQDPV TKIGPWGGGS GRPSDVDVLP RRLISVVIHS
401: GRVINSLMFT YSDCDGQQHS GGPWGGTANP LEGSSHTILL GQSDFLMEVS GTVGWNSENS DVVTSLYFVT NTGSYGPYGN GGGTRFRSPL RAMVVLSASL
501: PMLET
001: MSVEGKPASL GPWGGQSGHA WDDGMYTTVK QIIIAHGSGI DSIQIEYDKN GSSVWSEKRG GKGGKKFDKV KFDYPHEYLI SVNGTYGSFD VWGTICVRSL
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
101: TFESNRRKYG PFGVDSGTFF ALPKSGSKII GFHGKAGWYL DAIGVHTQPI PKENNPSSKI LLHSHQSFSQ GDKKHEYSVL QGSVGQNFDI VVTLRKKDPT
201: LPSFESRDSA GAEVTKHKLV TDTEKSQSKI EGGAKTYGPW GGTGGIMFDD GIYTGIRQIN LSRNVGIVSM KVCYDFRGQA VWGSKHGGVG GFKHDKIVFD
301: YPSEVLTHVT GTYGPLMYMG PNVIKSLTFR TNRGKHGPYG EEQGPSFTHQ MDEGKVVGFL GREGLFLDSI GVHVMECKIS SLKPSSPHNA IVPHNNSGTA
401: QIENSPWANK LVLAANGHGE EVDRGVVKEP TPSGPGPWGG DGGQAWDDGV FSGIKQIFVT RGNDAITSIQ IEYDRNGQSV WSIKHGGDSN GVATHRIKFE
501: YPDESITCIS GYYGPLNNSD RYNVVKSLSF YTSRGRYGPY GEETGTFFTS TTTQGKVLGF HGRSSFHLDA IGVHMQHWLG NNKSYYSRAS CFKLF
Arabidopsis Description
JAL3Jacalin-related lectin 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HQX1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.