Factsheet for TraesCS7A01G540200.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G540500.1	Wheat	cytosol, extracellular, peroxisome	15.32	63.82
TraesCS7B01G460600.1	Wheat	cytosol	63.03	58.08
TraesCS7A01G540300.1	Wheat	cytosol	42.18	55.39
TraesCS7A01G539900.1	Wheat	cytosol	63.51	51.15
TraesCS7D01G526500.1	Wheat	cytosol	33.49	43.62
TraesCS7A01G540400.2	Wheat	cytosol	16.11	35.17
TraesCS7A01G541400.1	Wheat	cytosol	50.08	32.71
TraesCS2A01G368500.1	Wheat	cytosol	12.32	31.33
TraesCS6A01G237600.1	Wheat	cytosol, golgi, plasma membrane	10.9	30.26
TraesCS4A01G476000.1	Wheat	cytosol	21.01	28.79
TraesCS2A01G024800.2	Wheat	cytosol, nucleus, plastid	6.64	28.19
TraesCS7A01G301500.1	Wheat	cytosol, golgi, plasma membrane	10.58	28.15
TraesCS5A01G444900.1	Wheat	cytosol	20.7	26.9
TraesCS7A01G300700.1	Wheat	cytosol	9.64	25.1
TraesCS2A01G412000.1	Wheat	cytosol, plastid	9.16	23.97
TraesCS7A01G540700.1	Wheat	plasma membrane	12.8	23.75
Zm00001d048612_P001	Maize	cytosol	25.12	22.46
TraesCS6A01G247700.1	Wheat	cytosol	7.9	21.37
TraesCS6A01G269800.1	Wheat	cytosol	8.69	20.15
TraesCS6A01G242200.1	Wheat	cytosol, golgi, plasma membrane	6.95	18.97
TraesCS6A01G004500.1	Wheat	cytosol	23.38	18.64
TraesCS3A01G467600.2	Wheat	cytosol	8.37	14.6
TraesCS5A01G524700.2	Wheat	nucleus	20.7	13.3
TraesCS4A01G479800.1	Wheat	cytosol	29.23	12.94
TraesCS4A01G497800.1	Wheat	cytosol	25.59	11.43
TraesCS4A01G309200.1	Wheat	cytosol, nucleus, plasma membrane	36.49	11.37
TraesCS3A01G073900.1	Wheat	cytosol	3.48	10.95
TraesCS5A01G445000.1	Wheat	cytosol	4.9	6.14

Protein Annotations

Gene3D:1.10.510.10	Gene3D:2.130.10.10	Gene3D:2.60.40.10	MapMan:20.7.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000535	InterPro:IPR000719	InterPro:IPR001680	InterPro:IPR013783
InterPro:IPR015943	InterPro:IPR017986	InterPro:Ig-like_fold	InterPro:Kinase-like_dom_sf	InterPro:MSP_dom	PFAM:PF00069
PFAM:PF00400	PFAM:PF00635	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082
PFscan:PS50202	PFscan:PS50294	PANTHER:PTHR19876	PANTHER:PTHR19876:SF6	InterPro:PapD-like_sf	InterPro:Prot_kinase_dom
SMART:SM00320	SUPFAM:SSF49354	SUPFAM:SSF50978	SUPFAM:SSF56112	EnsemblPlantsGene:TraesCS7A01G540200	EnsemblPlants:TraesCS7A01G540200.3
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200

Description

No Description!

Coordinates

chr7A:+:717254252..717270850

Molecular Weight (calculated)

72365.7 Da

IEP (calculated)

5.045

GRAVY (calculated)

-0.414

Length

633 amino acids

Sequence
(BLAST)

001: MDMKPDNILL DNDMVLKITD FGLSRLDEMT QTMSKDRLGS LGYCAPEYWS QGKMSFKSDM YSLGVIIIEL VTGQKALPIN NNKVLRRWRH RWRKTGKETQ
101: LVYQQVAKCI KIGLLCQEID PSERPFIWDI IDDIRQAEGV NGSIRNDSQY KFGQISPYSE DDDMLGIEPL ELHFSFQLNK QMSCTIQLTN ETGSYIAFNV
201: EHMNPLSYCA QPQKDIIPPR SKCNVEITMQ PQAKAPRDHT SEFTVWSTKV NDGLAIEDMA TIKFIKEAIN VVDDVNLDVA FDISEPQEAS EKTSVTVQPL
301: TQITDDVARA IWCMDAHQTE PLIITGHRFG DVQIWNSDTQ KVVDWVKASE EALSIVKFIA RIRWLVAVAY DCFFHVYKYE KEIEKVTSFK VHGYYEWGRC
401: SLDIHPTQPY VLSACHMQVK LWDWDQDWNC IQTFEEHSDN INELKFNLED TNSFASASDD CTVKVWSLDS PKSKYTLPGH SHHVYSVDFF KRDGQQYLIS
501: GCKDKTAKIW DLQKECVHTL QHECDVKSVF AHPSLPLLMT GGEDGAVRVW SSTDFRLKTK LGVSMPVRGF ACLTGSERVA IAHYYGMSVM EIGDEERQGG
601: NEGSHENSTA AIDYEKIQRQ SERAASTFFD PEI

Best Arabidopsis Sequence Match ( AT1G52360.1 )
(BLAST)

001: MPLRLEIKRK LAQRSERVKS VDLHPTEPWI LASLYSGTLC IWNYQTQVMA KSFEVTELPV RSAKFVARKQ WVVAGADDMY IRVYNYNTMD KVKVFEAHSD
101: YIRCVAVHPT LPYVLSSSDD MLIKLWDWEK GWACTQIFEG HSHYVMQVTF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT LDAHQKGVNC VDYFTGGDKP
201: YLITGSDDHT AKVWDYQTKS CVQTLEGHTH NVSAVCFHPE LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGYI KSSRRVVIGY DEGTIMVKLG
301: REIPVASMDN TGKIIWAKHN EIQTANIKSI GADYEVTDGE RLPLSVKELG TCDLYPQSLK HNPNGRFVVV CGDGEYIIYT ALAWRNRSFG SGLEFVWSSE
401: GECAVRESSS KIKIFSKNFQ EKRSIRPTFS AEKIFGGTLL AMCSSDFICF YDWAECRLIQ RIDVTVKNLY WADSGDLVAI ASDTSFYILK FNRDLVTSHF
501: DSGRPTEEEG VEDAFEVLHE NDERVRTGIW VGDCFIYNNS SWKLNYCVGG EVTTMYHLDR PMYLLGYLAS QSRVFLVDKE FNVIGYTLLL SLIEYKTLVM
601: RGDLDKASEI LPTIPKDQHN SVAHFLESRG MIEDALEIAT DPDYRFELAI QLGRLEIAQE IAVEVQSESK WKQLGELAMS SGKLQMAEEC MKYAMDLSGL
701: LLLYSSLGDA EGVTKLATLA KEQGKNNVAF LCLFMLGKLE DCLQLLVESN RIPEAALMAR SYLPSKVSEI VALWRKDLSK VNSKAAESLA DPEEYSNLFE
801: DWQVALSVEA KAVETRGVYT GAKDYPSHAD KSSMTLVEAF RNLQVEEEES LENGDMDHEE VVAEENGNEQ RNEDDVAEHV EEHHEEKEAE EEEGIVDGDS
901: TDGAVLVNGS EADEEWGTNN EGNPSA

Arabidopsis Description

Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:F4ICX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.